DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL27 and rpl27

DIOPT Version :9

Sequence 1:NP_001262966.1 Gene:RpL27 / 43103 FlyBaseID:FBgn0039359 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_001016180.1 Gene:rpl27 / 548934 XenbaseID:XB-GENE-999331 Length:136 Species:Xenopus tropicalis


Alignment Length:137 Identity:84/137 - (61%)
Similarity:105/137 - (76%) Gaps:3/137 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKNKLKKK 65
            |.|.||.||:|:||:||||||||:|||..||||.::.:.|||||||||||||||..|||.::.|:
 Frog     1 MGKFMKPGKVVLVLAGRYAGRKAVIVKNVDDGTSDRQYSHALVAGIDRYPRKVTATMGKKRIAKR 65

  Fly    66 SKVKPFLKSLNYNHLMPTRYTAHDISFEK-LSPKDL-KDPVKRKTHRFQTRVKFESVYKEGKNKW 128
            ||:|.|:|..||||||||||:. ||..:| :..||: :||..::..|.:.:||||..||.|||||
 Frog    66 SKIKSFVKVYNYNHLMPTRYSV-DIPLDKAVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKW 129

  Fly   129 FFQKLRF 135
            |||||||
 Frog   130 FFQKLRF 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL27NP_001262966.1 KOW 1..135 CDD:412330 82/135 (61%)
rpl27NP_001016180.1 KOW 1..136 CDD:381967 82/135 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 71 1.000 Domainoid score I9317
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H105144
Inparanoid 1 1.050 145 1.000 Inparanoid score I4335
OMA 1 1.010 - - QHG53799
OrthoDB 1 1.010 - - D1584965at2759
OrthoFinder 1 1.000 - - FOG0001918
OrthoInspector 1 1.000 - - oto105468
Panther 1 1.100 - - LDO PTHR10497
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1122
SonicParanoid 1 1.000 - - X1272
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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