DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL27 and rpl2702

DIOPT Version :10

Sequence 1:NP_651417.1 Gene:RpL27 / 43103 FlyBaseID:FBgn0039359 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_588378.1 Gene:rpl2702 / 2539336 PomBaseID:SPCC74.05 Length:136 Species:Schizosaccharomyces pombe


Alignment Length:136 Identity:64/136 - (47%)
Similarity:91/136 - (66%) Gaps:1/136 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKNKLKKK 65
            |.||:|.||:.:|..||:||:|.:|::..|.|:...|||||:|||::|||.||||.||..::.|:
pombe     1 MVKILKPGKVALVTRGRFAGKKVVILQNVDQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIAKR 65

  Fly    66 SKVKPFLKSLNYNHLMPTRYTAHDISFEKL-SPKDLKDPVKRKTHRFQTRVKFESVYKEGKNKWF 129
            |:||||:|.:||||||||||.....:.:.| :|....:|.:|...:...:..||..|:.||:.||
pombe    66 SRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKTVKNTFEEKYQTGKSAWF 130

  Fly   130 FQKLRF 135
            |..|||
pombe   131 FTPLRF 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL27NP_651417.1 KOW 1..135 CDD:469738 62/134 (46%)
rpl2702NP_588378.1 KOW 1..136 CDD:469738 62/134 (46%)

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