DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5028 and IDH1

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_014361.1 Gene:IDH1 / 855691 SGDID:S000004982 Length:360 Species:Saccharomyces cerevisiae


Alignment Length:364 Identity:168/364 - (46%)
Similarity:238/364 - (65%) Gaps:12/364 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VTKEKTEDVAHTKSALQKKVTGTDIPSAQYGGRHAVTMLPGGGIGPELMGYVREIFRYCGAPIDF 89
            :.|......|..:..|.||          ||||..||::||.|:|.|:...||.||.....|||:
Yeast     6 IAKRTLATAAQAERTLPKK----------YGGRFTVTLIPGDGVGKEITDSVRTIFEAENIPIDW 60

  Fly    90 EVIDIDPSTEGNDDLDYAITSIKRNGVALKGNIETKSQSLTEVSRNVAIRNELDLYVNVVHCKSY 154
            |.|:| ..|:..:.:..|:.|:|||.:.|||...|.:......|.|||:|.:||:|.||...||.
Yeast    61 ETINI-KQTDHKEGVYEAVESLKRNKIGLKGLWHTPADQTGHGSLNVALRKQLDIYANVALFKSL 124

  Fly   155 PGIPARHHDIDVVLIRQNTDGEYAMLEHESVPGIVESMKVVTVENAERVARYAFEFARQNNRKKV 219
            .|:..|..|||:::||:||:||::.||||||||:|||:||:|....||:||:||:||::.|||.|
Yeast   125 KGVKTRIPDIDLIVIRENTEGEFSGLEHESVPGVVESLKVMTRPKTERIARFAFDFAKKYNRKSV 189

  Fly   220 TTIHKANIMKLSDGLFLEVANRV-HKDYPELEHNNMIIDNTCMQSVSNPHQFDVMNMTNLYGTIV 283
            |.:||||||||.||||..:...: .|:||:::.:::|:||..||:|:.||||||:...::||||:
Yeast   190 TAVHKANIMKLGDGLFRNIITEIGQKEYPDIDVSSIIVDNASMQAVAKPHQFDVLVTPSMYGTIL 254

  Fly   284 SNVLCGLMGGAGLISGRNYGDHYAIFEPGTRNTGTAIAGKNIANPVAMISASIDMLNHLGHKEHA 348
            .|:...|:||.||::|.|:|..||:||||:|:.|..|.|:|:|||.|||.:|..||||||..|:|
Yeast   255 GNIGAALIGGPGLVAGANFGRDYAVFEPGSRHVGLDIKGQNVANPTAMILSSTLMLNHLGLNEYA 319

  Fly   349 NVIQEAVYQTIVNDAIRTPDIGGTNSSTDVVENILKILS 387
            ..|.:||::||......|.||||::|:||....|:..||
Yeast   320 TRISKAVHETIAEGKHTTRDIGGSSSTTDFTNEIINKLS 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 160/331 (48%)
IDH1NP_014361.1 mito_nad_idh 26..357 CDD:272942 160/331 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346415
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 327 1.000 Inparanoid score I436
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53770
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - oto99609
orthoMCL 1 0.900 - - OOG6_101342
Panther 1 1.100 - - O PTHR11835
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R585
SonicParanoid 1 1.000 - - X402
TreeFam 1 0.960 - -
1211.790

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