DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5028 and IMD2

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_178171.1 Gene:IMD2 / 844395 AraportID:AT1G80560 Length:405 Species:Arabidopsis thaliana


Alignment Length:367 Identity:96/367 - (26%)
Similarity:179/367 - (48%) Gaps:42/367 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RHAVTMLPGGGIGPELMGYVREIFRYCGA-----------PIDFEVIDIDPSTEGNDDLDYAITS 110
            |:.:|:|||.|||||::...:.:.:..|:           ||....:|:    .|....:..|::
plant    42 RYTITLLPGDGIGPEVVSIAKNVLQQAGSLEGVEFNFREMPIGGAALDL----VGVPLPEETISA 102

  Fly   111 IKRNGVALKGNI-----ETKSQSLTEVSRNVAIRNELDLYVNVVHCKSYPGIPARH-------HD 163
            .|.:...|.|.|     :...:.|......:.||..|.::.|:......|.:....       ..
plant   103 AKESDAVLLGAIGGYKWDNNEKHLRPEKGLLQIRAALKVFANLRPATVLPQLVDASTLKREVAEG 167

  Fly   164 IDVVLIRQNTDGEY-----AMLEHESVPGIVESMKVVTVENAERVARYAFEFARQNNRKKVTTIH 223
            :|::::|:.|.|.|     .:..:|:...:..:.:|......:|:||.|||.||: .|.|:.::.
plant   168 VDLMVVRELTGGIYFGEPRGIKTNENGEEVGFNTEVYAAHEIDRIARVAFETARK-RRGKLCSVD 231

  Fly   224 KANIMKLSDGLFLEVANRVHKDYPELEHNNMIIDNTCMQSVSNPHQFDVMNMTNLYGTIVSNVLC 288
            |||:::.|. |:.:....:..:||::|.::|.:||..||.|.:|.|||.:...|::|.|:|:...
plant   232 KANVLEASI-LWRKRVTALASEYPDVELSHMYVDNAAMQLVRDPKQFDTIVTNNIFGDILSDEAS 295

  Fly   289 GLMGGAGLISGRNYGDH-YAIFEPGTRNTGTAIAGKNIANPVAMISASIDMLNH-LGHKEHANVI 351
            .:.|..|::...:..|. ..:||| ...:...|||::.|||:|.|.::..:|.: ||.::.|..|
plant   296 MITGSIGMLPSASLSDSGPGLFEP-IHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEKAAKRI 359

  Fly   352 QEAVYQTIVNDAIRTPDI--GGTN--SSTDVVENILKILSAK 389
            ::||. ..:|:..||.||  .||.  ...::.|.:||.:.::
plant   360 EDAVL-VALNNGFRTGDIYSAGTKLVGCKEMGEEVLKSVDSQ 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 96/362 (27%)
IMD2NP_178171.1 Iso_dh 1..405 CDD:351095 96/367 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D868374at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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