DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5028 and IMD1

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_196924.1 Gene:IMD1 / 831270 AraportID:AT5G14200 Length:409 Species:Arabidopsis thaliana


Alignment Length:368 Identity:93/368 - (25%)
Similarity:176/368 - (47%) Gaps:44/368 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RHAVTMLPGGGIGPELMGYVREIFRYCGA----PIDFEVIDIDPSTEGNDDLDY--------AIT 109
            |:.:.:|||.|||||::...:.:.:..|:    ..||:.:.:     |...||.        ..|
plant    46 RYNIALLPGDGIGPEVISVAKNVLQKAGSLEGLEFDFKEMPV-----GGAALDLVGVPLPEETFT 105

  Fly   110 SIKRNGVALKGNI-----ETKSQSLTEVSRNVAIRNELDLYVNVVHCKSYPGIPARH-------H 162
            :.|.:...|.|.|     :...:.|........:|.:|.::.|:......|.:....       .
plant   106 AAKLSDAILLGAIGGYKWDKNEKHLRPEMALFYLRRDLKVFANLRPATVLPQLVDASTLKKEVAE 170

  Fly   163 DIDVVLIRQNTDGEY-----AMLEHESVPGIVESMKVVTVENAERVARYAFEFARQNNRKKVTTI 222
            .:|::::|:.|.|.|     .:..:|:...:..|.::......:|:||.|||.||: .|.|:.::
plant   171 GVDMMIVRELTGGIYFGEPRGITINENGEEVGVSTEIYAAHEIDRIARVAFETARK-RRGKLCSV 234

  Fly   223 HKANIMKLSDGLFLEVANRVHKDYPELEHNNMIIDNTCMQSVSNPHQFDVMNMTNLYGTIVSNVL 287
            .|||::..|. |:.:....:..:||::|.::|.:||..||.:.:|.|||.:...|::|.|:|:..
plant   235 DKANVLDASI-LWRKRVTALASEYPDVELSHMYVDNAAMQLIRDPKQFDTIVTNNIFGDILSDEA 298

  Fly   288 CGLMGGAGLISGRNYGDH-YAIFEPGTRNTGTAIAGKNIANPVAMISASIDMLNH-LGHKEHANV 350
            ..:.|..|::...:.|:. ..:||| ...:...|||::.|||:|.|.::..:|.: ||.::.|..
plant   299 SMITGSIGMLPSASLGESGPGLFEP-IHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEKAAKR 362

  Fly   351 IQEAVYQTIVNDAIRTPDIGGTNSS----TDVVENILKILSAK 389
            |::||...: |...||.||....:.    .::.|.:||.:.:|
plant   363 IEDAVVDAL-NKGFRTGDIYSPGNKLVGCKEMGEEVLKSVESK 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 92/363 (25%)
IMD1NP_196924.1 PLN02329 1..409 CDD:215188 93/368 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D868374at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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