DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5028 and IDH1

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_195252.1 Gene:IDH1 / 829679 AraportID:AT4G35260 Length:367 Species:Arabidopsis thaliana


Alignment Length:347 Identity:156/347 - (44%)
Similarity:218/347 - (62%) Gaps:20/347 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TDIPSAQYGGRHAVTMLPGGGIGPELMGYVREIFRYCGAPIDFEVID-------IDPSTEGNDDL 104
            |.:|....|...|||::||.||||.:...|.::.....|||.||..|       :.|.       
plant    27 TYMPRPGDGAPRAVTLIPGDGIGPLVTNAVEQVMEAMHAPIFFEKYDVHGEMSRVPPE------- 84

  Fly   105 DYAITSIKRNGVALKGNIETKSQSLTEVSRNVAIRNELDLYVNVVHCKSYPGIPARHHDIDVVLI 169
              .:.||::|.|.|||.::|....... |.||.:|.||||:.::|:|.:.||:|.||.::|:|:|
plant    85 --VMESIRKNKVCLKGGLKTPVGGGVS-SLNVQLRKELDLFASLVNCFNLPGLPTRHENVDIVVI 146

  Fly   170 RQNTDGEYAMLEHESVPGIVESMKVVTVENAERVARYAFEFARQNNRKKVTTIHKANIMKLSDGL 234
            |:||:||||.||||.|||:|||:||:|...:||:|:||||:|..|||||||.:||||||||:|||
plant   147 RENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGL 211

  Fly   235 FLEVANRVHKDYPELEHNNMIIDNTCMQSVSNPHQFDVMNMTNLYGTIVSNVLCGLMGGAGLISG 299
            |||....|.|.||.:.:|.:|:||.|||.|:.|.|||||...||||.:|:|...|:.||.|::.|
plant   212 FLESCREVAKKYPSITYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPG 276

  Fly   300 RNYGDHYAIFEPGTR--NTG-TAIAGKNIANPVAMISASIDMLNHLGHKEHANVIQEAVYQTIVN 361
            .|.|..:|:||.|..  |.| ..|..:|.|||||::.:|..||.||.....|:.::.||.:.|..
plant   277 GNVGADHAVFEQGASAGNVGKDKIVLENKANPVALLLSSAMMLRHLQFPSFADRLETAVKKVIAE 341

  Fly   362 DAIRTPDIGGTNSSTDVVENIL 383
            ...||.|:|||:::.:||:.::
plant   342 GKCRTKDLGGTSTTQEVVDAVI 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 154/339 (45%)
IDH1NP_195252.1 PLN00123 8..367 CDD:215065 156/347 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D868374at2759
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101342
Panther 1 1.100 - - O PTHR11835
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.790

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