DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idh3g and IDH-VI

DIOPT Version :10

Sequence 1:NP_651416.1 Gene:Idh3g / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_850549.1 Gene:IDH-VI / 820139 AraportID:AT3G09810 Length:374 Species:Arabidopsis thaliana


Alignment Length:330 Identity:137/330 - (41%)
Similarity:198/330 - (60%) Gaps:14/330 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 TMLPGGGIGPELMGYVREIFRYCGAPID----FEVIDIDPSTEGNDDLDY-AITSIKRNGVALKG 120
            |:.||.|||||:...|:::|......||    |...::||.|  |..|.: .:.|:.:|.|.|||
plant    47 TLFPGDGIGPEIAESVKQVFTAADVVIDWDEQFVGTEVDPRT--NSFLTWDNLQSVLKNKVGLKG 109

  Fly   121 NIET---KSQSLTEVSRNVAIRNELDLYVNVVHCKSYPGIPARHHDIDVVLIRQNTDGEYAMLEH 182
            .:.|   |...    |.|:.:|.||:||.||..|.|.||...|:.|:|::.||:||:|||:.|||
plant   110 PMATPIGKGHR----SLNLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIRENTEGEYSGLEH 170

  Fly   183 ESVPGIVESMKVVTVENAERVARYAFEFARQNNRKKVTTIHKANIMKLSDGLFLEVANRVHKDYP 247
            :.|.|:|||:|::|.:.:.|||.|||.:|:.:.||||:.|||||||:.:|||||:..:.|...||
plant   171 QVVKGVVESLKIITRKASMRVAEYAFLYAKTHGRKKVSAIHKANIMQKTDGLFLQCCDEVAAKYP 235

  Fly   248 ELEHNNMIIDNTCMQSVSNPHQFDVMNMTNLYGTIVSNVLCGLMGGAGLISGRNYGDHYAIFEPG 312
            |:.:..::|||.||..|.||..|||:.|.||||.|:|::..||:||.||....|.|:........
plant   236 EIYYEKVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSMNIGEDGIALAEA 300

  Fly   313 TRNTGTAIAGKNIANPVAMISASIDMLNHLGHKEHANVIQEAVYQTIVNDAIRTPDIGGTNSSTD 377
            ...:...|||.|:|||.|::.:.:.||.||...:.|..|..|:..||.....||.|:||::::||
plant   301 VHGSAPDIAGMNLANPTALLLSGVMMLRHLKLNKQAEQIHSAIINTIAEGKYRTADLGGSSTTTD 365

  Fly   378 VVENI 382
            ..:.|
plant   366 FTKAI 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3gNP_651416.1 mito_nad_idh 55..386 CDD:272942 137/330 (42%)
IDH-VINP_850549.1 PLN00118 3..374 CDD:215062 137/330 (42%)

Return to query results.
Submit another query.