DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5028 and idh3g

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_001230101.1 Gene:idh3g / 550579 ZFINID:ZDB-GENE-050417-435 Length:391 Species:Danio rerio


Alignment Length:340 Identity:182/340 - (53%)
Similarity:250/340 - (73%) Gaps:1/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PSAQYGGRHAVTMLPGGGIGPELMGYVREIFRYCGAPIDFEVIDIDPSTEGNDDLDYAITSIKRN 114
            |.|:|||||.||::||.||||||:.:|||:||:...|:||||:.::.|:...||:..||.:|:||
Zfish    44 PPAKYGGRHTVTLIPGDGIGPELLNHVRELFRFSCVPVDFEVVHVNSSSTSEDDISNAIMAIRRN 108

  Fly   115 GVALKGNIETK-SQSLTEVSRNVAIRNELDLYVNVVHCKSYPGIPARHHDIDVVLIRQNTDGEYA 178
            ||||||||||. :......|||..:|..||||.||:||:|.||:..||.:||:::||:||:|||:
Zfish   109 GVALKGNIETNHTMPPNHKSRNNLLRTSLDLYANVMHCQSLPGVQTRHKNIDIIIIRENTEGEYS 173

  Fly   179 MLEHESVPGIVESMKVVTVENAERVARYAFEFARQNNRKKVTTIHKANIMKLSDGLFLEVANRVH 243
            .|||||..|:||.:|::|..|:.|:|.|||:.||:..|::||.:||||||||.|||||:....|.
Zfish   174 SLEHESASGVVECLKIITRNNSLRIADYAFKLAREKGRRRVTAVHKANIMKLGDGLFLQCCKEVA 238

  Fly   244 KDYPELEHNNMIIDNTCMQSVSNPHQFDVMNMTNLYGTIVSNVLCGLMGGAGLISGRNYGDHYAI 308
            ..||::|..|||:|||.||.||.|:|||||.|.||||.:||||..||:||.||:.|.|||..||:
Zfish   239 SGYPDIEFENMIVDNTTMQLVSKPYQFDVMVMPNLYGNVVSNVCAGLVGGPGLVPGANYGRDYAV 303

  Fly   309 FEPGTRNTGTAIAGKNIANPVAMISASIDMLNHLGHKEHANVIQEAVYQTIVNDAIRTPDIGGTN 373
            ||..|||||.:||.:|||||.||:.||..||:||...::||:|:.|:..|:....:.|.||||..
Zfish   304 FETATRNTGKSIANRNIANPTAMLLASCLMLDHLKLHDYANMIRSAILTTMNETRLHTVDIGGQG 368

  Fly   374 SSTDVVENILKILSA 388
            ::::||::|::|:.:
Zfish   369 TTSEVVQSIMRIIQS 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 178/331 (54%)
idh3gNP_001230101.1 mito_nad_idh 49..381 CDD:272942 178/331 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595647
Domainoid 1 1.000 361 1.000 Domainoid score I909
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55803
Inparanoid 1 1.050 386 1.000 Inparanoid score I1976
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - oto40550
orthoMCL 1 0.900 - - OOG6_101342
Panther 1 1.100 - - LDO PTHR11835
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R585
SonicParanoid 1 1.000 - - X402
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.