DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5028 and idh3b

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:XP_017208256.1 Gene:idh3b / 415247 ZFINID:ZDB-GENE-040625-174 Length:386 Species:Danio rerio


Alignment Length:375 Identity:158/375 - (42%)
Similarity:239/375 - (63%) Gaps:7/375 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RGYPLLVTKEKT----EDVAHTKSALQKKVTGTDIPSAQYGGRHAVTMLPGGGIGPELMGYVREI 79
            ||..|.:.|..|    :.:.....:|.......:.|.|:......|||:||.|:|||||..|:|:
Zfish     7 RGSVLTLAKGLTGVRLQPLCARSLSLTSSQNVPESPPARADSTFKVTMVPGDGVGPELMTAVKEV 71

  Fly    80 FRYCGAPIDFEVIDID--PSTEGNDDLDYAITSIKRNGVALKGNIETKSQSLTEV-SRNVAIRNE 141
            |:....|::||...:.  .:....:.|:..::|:|.|.||:||.|.|..:...|: |..:.:|.:
Zfish    72 FKAADVPVEFEEFHLSEVQNMASEEKLNEVLSSMKNNRVAIKGKIHTPMEYKGELASYEMRLRRK 136

  Fly   142 LDLYVNVVHCKSYPGIPARHHDIDVVLIRQNTDGEYAMLEHESVPGIVESMKVVTVENAERVARY 206
            |||:.||||.||.||...||:::|:|:||:.|:|||:.||||||.|:||.:|::|.|.:.|:|::
Zfish   137 LDLFANVVHVKSLPGYSTRHNNLDLVIIREQTEGEYSSLEHESVAGVVECLKIITREKSRRIAKF 201

  Fly   207 AFEFARQNNRKKVTTIHKANIMKLSDGLFLEVANRVHKDYPELEHNNMIIDNTCMQSVSNPHQFD 271
            ||::|.:..|.|||.:||||||||.|||||:....|.:.||::::.|:||||.|||.|.||:|||
Zfish   202 AFDYATKKGRSKVTAVHKANIMKLGDGLFLQSCAEVAELYPKIKYENVIIDNCCMQLVQNPYQFD 266

  Fly   272 VMNMTNLYGTIVSNVLCGLMGGAGLISGRNYGDHYAIFEPGTRNTGTAIAGKNIANPVAMISASI 336
            |:.|.||||.|:.|:..||:||||::.|.:|...||:||.|.|:......|:|||||.||:.::.
Zfish   267 VLVMPNLYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSAS 331

  Fly   337 DMLNHLGHKEHANVIQEAVYQTIVNDAIRTPDIGGTNSSTDVVENILKIL 386
            :||.||..:.|:|::.|||.:.|....:||.|:||.:::.|.:..|:..|
Zfish   332 NMLKHLNLEYHSNMVSEAVKKVIKQGKVRTRDLGGYSTTGDFIRAIVASL 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 149/333 (45%)
idh3bXP_017208256.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101342
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R585
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.760

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