DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5028 and idh3a

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_957245.2 Gene:idh3a / 393926 ZFINID:ZDB-GENE-040426-1007 Length:365 Species:Danio rerio


Alignment Length:358 Identity:135/358 - (37%)
Similarity:201/358 - (56%) Gaps:34/358 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TGTDIPSAQYGGRHAVTMLPGGGIGPELMGYVREIFRYCGAPIDFEVIDIDPSTEGNDDLDYAIT 109
            |.|..|.....|...||::||.|||||:...|.:||.....||.:|        |.|      :|
Zfish    18 TQTPQPRVFSRGIQTVTLIPGDGIGPEISTAVMKIFEAAKTPIQWE--------ERN------VT 68

  Fly   110 SIK-----------------RNGVALKGNIETKSQSLTEVSRNVAIRNELDLYVNVVHCKSYPGI 157
            :||                 :|.:.|||.::|.. :....|.|:.:|...|||.||..|.|..|.
Zfish    69 AIKGPGGRWMIPPEAKESMDKNKIGLKGPLKTPI-AAGHPSMNLLLRKTFDLYANVRPCVSIEGY 132

  Fly   158 PARHHDIDVVLIRQNTDGEYAMLEHESVPGIVESMKVVTVENAERVARYAFEFARQNNRKKVTTI 222
            ...:.|:|:|.||:||:|||:.:||..|.|:|:|:|::|.|.:.|:|.||||:||.|.|..||.:
Zfish   133 KTPYTDVDLVTIRENTEGEYSGIEHVIVDGVVQSIKLITEEASRRIAEYAFEYARNNQRTSVTAV 197

  Fly   223 HKANIMKLSDGLFLEVANRVHKDYPELEHNNMIIDNTCMQSVSNPHQFDVMNMTNLYGTIVSNVL 287
            ||||||::||||||.....|.:::.:::...|.:|..|:..|.:|.||||:.|.||||.|:|::.
Zfish   198 HKANIMRMSDGLFLRKCREVAENFKDVKFTEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLC 262

  Fly   288 CGLMGGAGLISGRNYG-DHYAIFEPGTRNTGTAIAGKNIANPVAMISASIDMLNHLGHKEHANVI 351
            .||:||.|:....|.| :..|||| ....|...||||::|||.|::.:::.||.|:|...||..|
Zfish   263 AGLIGGLGVTPSGNIGANGVAIFE-SVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLHGHAKKI 326

  Fly   352 QEAVYQTIVNDAIRTPDIGGTNSSTDVVENILK 384
            :.|.:.||.:..:.|.|:||.:..::...:|.:
Zfish   327 ETACFDTIRDKKVLTKDLGGNSKCSEFTADICR 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 132/348 (38%)
idh3aNP_957245.2 mito_nad_idh 29..361 CDD:272942 132/347 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X402
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.830

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