DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5028 and idh2

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_595203.2 Gene:idh2 / 2541260 PomBaseID:SPBC902.05c Length:379 Species:Schizosaccharomyces pombe


Alignment Length:355 Identity:142/355 - (40%)
Similarity:215/355 - (60%) Gaps:18/355 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KKVTGTDIPSAQYGGRHAVTMLPGGGIGPELMGYVREIFRYCGAPIDFEVIDIDP-----STEGN 101
            |...||........|.:.|||:.|.|||||:...|..||:....||::|.:.:.|     :|...
pombe    31 KAAAGTYEGVKNANGNYTVTMIAGDGIGPEIAQSVERIFKAAKVPIEWERVKVYPILKNGTTTIP 95

  Fly   102 DDLDYAITSIKRNGVALKGNIETKSQSLTEVSRNVAIRNELDLYVNVVHCKSYPGIPARHHDIDV 166
            ||   |..|:::|.|||||.:.|.. ....||.|:.:|....|:.||..|.|..|....:.:::.
pombe    96 DD---AKESVRKNKVALKGPLATPI-GKGHVSMNLTLRRTFGLFANVRPCVSITGYKTPYDNVNT 156

  Fly   167 VLIRQNTDGEYAMLEHESVPGIVESMKVVTVENAERVARYAFEFARQNNRKKVTTIHKANIMKLS 231
            ||||:||:|||:.:|||.:||:|:|:|::|...:|||.||||::|||..:..:|.:|||.||:::
pombe   157 VLIRENTEGEYSGIEHEVIPGVVQSIKLITRAASERVIRYAFQYARQTGKNNITVVHKATIMRMA 221

  Fly   232 DGLFLEVANRVHKDYPELEHNNMIIDNTCMQSVSNPHQFD--VMNMTNLYGTIVSNVLCGLMGGA 294
            ||||||.|..:..:||::|....|:||.|::.|::|..::  ||.|.||||.|||::..||:||.
pombe   222 DGLFLECAKELAPEYPDIELREEILDNACLKIVTDPVPYNNTVMVMPNLYGDIVSDMCAGLIGGL 286

  Fly   295 GLISGRNYGDHYAIFEPGTRNTGTAIAGKNIANPVAMISASIDMLNHLGHKEHANVIQEAVYQTI 359
            ||....|.|:..:||| ....|...||||.:|||.|::.:|:.||.|:...::|..|:.|::.|:
pombe   287 GLTPSGNIGNQASIFE-AVHGTAPDIAGKGLANPTALLLSSVMMLKHMNLNDYAKRIESAIFDTL 350

  Fly   360 VN--DAIRTPDIGGTNSS---TDVVENILK 384
            .|  || ||.|:||.:::   ||.:.:.||
pombe   351 ANNPDA-RTKDLGGKSNNVQYTDAIISKLK 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 139/342 (41%)
idh2NP_595203.2 Iso_dh 44..378 CDD:294303 137/339 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53770
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X402
TreeFam 00.000 Not matched by this tool.
54.820

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