DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5028 and Idh3g

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:XP_006229613.1 Gene:Idh3g / 25179 RGDID:2863 Length:395 Species:Rattus norvegicus


Alignment Length:392 Identity:194/392 - (49%)
Similarity:267/392 - (68%) Gaps:10/392 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RLLQTQT-PFLTRGYPLLVTKEKTEDVAH--TKSALQKKVTGTDIPSAQYGGRHAVTMLPGGGIG 69
            |.|.|.| |:|..|..|:..:|.|:...|  ....|.........|||:|||||.|||:||.|||
  Rat     4 RSLGTATLPWLACGLVLVGRRELTQARVHIGVSKGLPSPFPFFQPPSAKYGGRHTVTMIPGDGIG 68

  Fly    70 PELMGYVREIFRYCGAPIDFEVIDIDPSTEGNDDLDYAITSIKRNGVALKGNIETKSQSL--TEV 132
            ||||.:|:.:||:...|:|||.:.:. |....:|:..||.:|:||.||||||||| :.:|  :..
  Rat    69 PELMLHVKSVFRHACVPVDFEEVHVS-SNADEEDIRNAIMAIRRNRVALKGNIET-NHNLPPSHK 131

  Fly   133 SRNVAIRNELDLYVNVVHCKSYPGIPARHHDIDVVLIRQNTDGEYAMLEHESVPGIVESMKVVTV 197
            |||..:|..||||.||:||||.||:..||.|||::::|:||:|||:.||||||.|:|||:|::|.
  Rat   132 SRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHESVAGVVESLKIITK 196

  Fly   198 ENAERVARYAFEFARQNNRKKVTTIHKANIMKLSDGLFLEVANRVHKDYPELEHNNMIIDNTCMQ 262
            ..:.|:|.|||:.|:::.|||||.:||||||||.|||||:....|...||::..::||:|||.||
  Rat   197 AKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFDSMIVDNTTMQ 261

  Fly   263 SVSNPHQFDVMNMTNLYGTIVSNVLCGLMGGAGLISGRNYGDHYAIFEPGTRNTGTAIAGKNIAN 327
            .||.|.|||||.|.||||.||:||..||:||.||::|.|||..||:||..|||||.:||.|||||
  Rat   262 LVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIAN 326

  Fly   328 PVAMISASIDMLNHLGHKEHANVIQEAVYQTIVNDAIRTPDIGGTNSSTDVVENI---LKILSAK 389
            |.|.:.||..||:||....:|..|::||..::.|:.:.||||||..:::..:::|   ::|::.:
  Rat   327 PTATLLASCMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSQAIQDIIRHIRIINGR 391

  Fly   390 RV 391
            .|
  Rat   392 AV 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 176/335 (53%)
Idh3gXP_006229613.1 mito_nad_idh 54..385 CDD:272942 176/332 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353519
Domainoid 1 1.000 345 1.000 Domainoid score I1019
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55803
Inparanoid 1 1.050 369 1.000 Inparanoid score I2070
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - otm45435
orthoMCL 1 0.900 - - OOG6_101342
Panther 1 1.100 - - LDO PTHR11835
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X402
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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