DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5028 and idhg-1

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_497927.2 Gene:idhg-1 / 175598 WormBaseID:WBGene00009440 Length:396 Species:Caenorhabditis elegans


Alignment Length:380 Identity:193/380 - (50%)
Similarity:270/380 - (71%) Gaps:26/380 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VAHT----KSALQKKVTGTDIPS-----------------AQYGGRHAVTMLPGGGIGPELMGYV 76
            :.||    |:.:||....|...|                 |:|||||.||:|||.|||||::.:|
 Worm     6 LGHTLRSSKNVVQKAFVATSPNSDMLRFRSPVLQTNTTKLARYGGRHNVTVLPGDGIGPEMLHHV 70

  Fly    77 REIFRYCGAPIDFEVIDIDPSTEGNDDLDYAITSIKRNGVALKGNIETKSQSLTEVSRNVAIRNE 141
            ..|.....||:||||:::....:.::||..|||:|||||||||||||||..:.:.||||:.:|.:
 Worm    71 ERILSAVQAPVDFEVVNLTSKEDASEDLAEAITAIKRNGVALKGNIETKFDNPSFVSRNLELRRQ 135

  Fly   142 LDLYVNVVHCKSYPGIPARHHDIDVVLIRQNTDGEYAMLEHESV----PGIVESMKVVTVENAER 202
            |:||.||:||.:.|.:|:||..||:|:||:||:|||:..|||:|    |.:|||:||||.|.:|:
 Worm   136 LNLYANVLHCSTIPTVPSRHTGIDMVIIRENTEGEYSGNEHEAVNAPHPRVVESLKVVTREKSEQ 200

  Fly   203 VARYAFEFARQNNRKKVTTIHKANIMKLSDGLFLEVANRVHK-DYPELEHNNMIIDNTCMQSVSN 266
            :.|:||:||::..|||||.:|||||.||.|||||:||..:.| :||::|.|.||:||..||.||.
 Worm   201 ITRFAFQFAKKYGRKKVTAVHKANIQKLGDGLFLKVATDIAKAEYPDIEFNAMIVDNASMQLVSR 265

  Fly   267 PHQFDVMNMTNLYGTIVSNVLCGLMGGAGLISGRNYGDHYAIFEPGTRNTGTAIAGKNIANPVAM 331
            |.|||||.|.||||.|:||:.|||:||.||:||.|.|:.||:||.|||||||.:|||::|||.|.
 Worm   266 PQQFDVMLMPNLYGNIISNIACGLVGGPGLVSGMNIGEDYAVFETGTRNTGTTLAGKDLANPTAF 330

  Fly   332 ISASIDMLNHLGHKEHANVIQEAVYQTIVNDAIRTPDIGGTNSSTDVVENILKIL 386
            |.|::|||..||.:.||::|.:::::|:|:..|.|.|||||:.|:::|:::|..:
 Worm   331 IRAAVDMLRFLGLQSHADMISDSLFRTLVDKRIHTADIGGTSKSSELVQSVLDFI 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 184/335 (55%)
idhg-1NP_497927.2 Iso_dh 49..383 CDD:294303 183/333 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167072
Domainoid 1 1.000 380 1.000 Domainoid score I447
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55803
Inparanoid 1 1.050 401 1.000 Inparanoid score I1090
Isobase 1 0.950 - 0 Normalized mean entropy S556
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - otm14597
orthoMCL 1 0.900 - - OOG6_101342
Panther 1 1.100 - - LDO PTHR11835
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X402
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.760

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