DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5028 and idha-1

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_492330.2 Gene:idha-1 / 172655 WormBaseID:WBGene00009664 Length:358 Species:Caenorhabditis elegans


Alignment Length:350 Identity:138/350 - (39%)
Similarity:208/350 - (59%) Gaps:15/350 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KKVTGTDIPSAQY--GGRHAVTMLPGGGIGPELMGYVREIFRYCGAPIDFEVIDIDPSTEGNDDL 104
            ||.:.|...|.:|  |....||::||.|||||:...|::||....|||.::.:|:.| .:|.|.:
 Worm     7 KKASSTVGQSIRYSSGDVRRVTLIPGDGIGPEISASVQKIFEAADAPIAWDPVDVTP-VKGRDGV 70

  Fly   105 ----DYAITSIKRNGVALKGNIET---KSQSLTEVSRNVAIRNELDLYVNVVHCKSYPGIPARHH 162
                ...|..:..|.|.|||.:||   |...    |.|:|:|.|..||.||..|:|..|....:.
 Worm    71 FRIPSRCIELMHANKVGLKGPLETPIGKGHR----SLNLAVRKEFSLYANVRPCRSLEGHKTLYD 131

  Fly   163 DIDVVLIRQNTDGEYAMLEHESVPGIVESMKVVTVENAERVARYAFEFARQNNRKKVTTIHKANI 227
            ::|||.||:||:|||:.:|||.|||:|:|:|::|...:..||.:|||:||||.||.||.:|||||
 Worm   132 NVDVVTIRENTEGEYSGIEHEIVPGVVQSIKLITETASRNVASFAFEYARQNGRKVVTAVHKANI 196

  Fly   228 MKLSDGLFLEVANRVHKDYPELEHNNMIIDNTCMQSVSNPHQFDVMNMTNLYGTIVSNVLCGLMG 292
            |:.||||||.:.......||:::.....:|..|:..|.:|.|:||:.|.||||.|:|::..||:|
 Worm   197 MRQSDGLFLSICREQAALYPDIKFKEAYLDTVCLNMVQDPSQYDVLVMPNLYGDILSDLCAGLVG 261

  Fly   293 GAGLISGRNYGDHYAIFEPGTRNTGTAIAGKNIANPVAMISASIDMLNHLGHKEHANVIQEAVYQ 357
            |.|:....|.|...|:|| ....|...|||::.|||.|::.:::.||.::...:||..|::||:.
 Worm   262 GLGVTPSGNIGKGAAVFE-SVHGTAPDIAGQDKANPTALLLSAVMMLRYMNLPQHAARIEKAVFD 325

  Fly   358 TIVNDAIRTPDIGGTNSSTDVVENI 382
            .|.:...:|.|:|||.:.:....::
 Worm   326 AIADGRAKTGDLGGTGTCSSFTADV 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 133/334 (40%)
idha-1NP_492330.2 Iso_dh 22..354 CDD:294303 133/334 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X402
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.830

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