DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5028 and idhg-2

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_491989.1 Gene:idhg-2 / 172430 WormBaseID:WBGene00016266 Length:373 Species:Caenorhabditis elegans


Alignment Length:369 Identity:198/369 - (53%)
Similarity:268/369 - (72%) Gaps:9/369 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LVTKEKTEDVAHTKSALQ-KKVTGTDIPSAQYGGRHAVTMLPGGGIGPELMGYVREIFRYCGAPI 87
            :.:|...:.|....||:: .::.|..:|.|:|||||.|..|||.|||||::.::|.||.:|.||:
 Worm     1 MFSKLPIQAVRGAASAIRTHQIPGHRLPLAKYGGRHTVCALPGDGIGPEMIAHIRNIFSFCHAPV 65

  Fly    88 DFEVIDIDPS-TEGNDDLDYAITSIKRNGVALKGNIETKSQSLTEVSRNVAIRNELDLYVNVVHC 151
            :||.:.:..| .:|  |:|.|:.:|:|||||:|||||||.......||||.:|.:||||.|::||
 Worm    66 NFEEVQVSSSLLDG--DMDAAMLAIERNGVAIKGNIETKHDDPQFNSRNVELRTKLDLYANILHC 128

  Fly   152 KSYPGIPARHHDIDVVLIRQNTDGEYAMLEHESVPGIVESMKVVTVENAERVARYAFEFARQNNR 216
            .:.|.:|.||..||:||||:||:|||:.||||:|||||||:|:||.|..||::|.|||:|:.|.|
 Worm   129 VTIPTVPTRHSGIDIVLIRENTEGEYSGLEHEAVPGIVESIKIVTREKIERISRMAFEYAKANGR 193

  Fly   217 KKVTTIHKANIMKLSDGLFLEVANRVHKDYPELEHNNMIIDNTCMQSVSNPHQFDVMNMTNLYGT 281
            ||||.:|||||.||.|||||:|...:.:||.:::...||:||..||.||.|.|||||.|.||||.
 Worm   194 KKVTAVHKANIQKLGDGLFLKVVRDMSEDYKDIKFEAMIVDNASMQLVSKPQQFDVMVMPNLYGN 258

  Fly   282 IVSNVLCGLMGGAGLISGRNYGDHYAIFEPGTRNTGTAIAGKNIANPVAMISASIDMLNHLGHKE 346
            |:||:.|||:||.||:||.|.||.||:||.|||||||::|||:||||.|.|.||:|||.:||...
 Worm   259 IISNIACGLVGGPGLVSGMNLGDKYAVFETGTRNTGTSLAGKDIANPTAFIRASVDMLRYLGCHY 323

  Fly   347 HANVIQEAVYQTIVNDAIRTPDIGGTNSSTDVV----ENILKIL 386
            |||:|.:|:::.:|...|.|.||||.||::||:    :|| |:|
 Worm   324 HANIISDALWKALVEQRIHTADIGGNNSASDVINATLQNI-KVL 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 189/335 (56%)
idhg-2NP_491989.1 Iso_dh 33..363 CDD:294303 186/331 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167070
Domainoid 1 1.000 380 1.000 Domainoid score I447
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55803
Inparanoid 1 1.050 401 1.000 Inparanoid score I1090
Isobase 1 0.950 - 0 Normalized mean entropy S556
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - otm14597
orthoMCL 1 0.900 - - OOG6_101342
Panther 1 1.100 - - O PTHR11835
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R585
SonicParanoid 1 1.000 - - X402
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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