DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5028 and Idh3b

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_570954.1 Gene:Idh3b / 170718 MGIID:2158650 Length:384 Species:Mus musculus


Alignment Length:395 Identity:161/395 - (40%)
Similarity:245/395 - (62%) Gaps:24/395 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LTQRLLQTQTPFLTRGYPLLVTKEKTEDVAHTKSALQKKVTGTDIPSAQYGGRHAVTMLPGGGIG 69
            ||:.:|..:.....||   |.|     ..||..|..|.:       ..:..|...||||||.|:|
Mouse    10 LTRAVLAARNSGAWRG---LGT-----STAHAASQSQAQ-------DVRVEGAFPVTMLPGDGVG 59

  Fly    70 PELMGYVREIFRYCGAPIDFEVIDID--PSTEGNDDLDYAITSIKRNGVALKGNIETKSQSLTEV 132
            ||||..|:|:|:....|::|:...:.  .:....:.|:..::|:|.|.||:.|.|.|..:...|:
Mouse    60 PELMHAVKEVFKAAAVPVEFKEHHLSEVQNMASEEKLEQVLSSMKENKVAIIGKIYTPMEYKGEL 124

  Fly   133 -SRNVAIRNELDLYVNVVHCKSYPGIPARHHDIDVVLIRQNTDGEYAMLEHESVPGIVESMKVVT 196
             |.::.:|.:|||:.||||.||.||...||:::|:|:||:.|:|||:.|||||..|::|.:|:||
Mouse   125 ASYDMQLRRKLDLFANVVHVKSLPGYKTRHNNLDLVIIREQTEGEYSSLEHESAKGVIECLKIVT 189

  Fly   197 VENAERVARYAFEFARQNNRKKVTTIHKANIMKLSDGLFLEVANRVHKDYPELEHNNMIIDNTCM 261
            ...::|:|::||::|.:..|.|||.:||||||||.|||||:....|.:.||:::...|||||.||
Mouse   190 RTKSQRIAKFAFDYATKKGRSKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCM 254

  Fly   262 QSVSNPHQFDVMNMTNLYGTIVSNVLCGLMGGAGLISGRNYGDHYAIFEPGTRNTGTAIAGKNIA 326
            |.|.||:||||:.|.||||.|:.|:..||:||||::.|.:|...||:||.|.|:......|:|||
Mouse   255 QLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIA 319

  Fly   327 NPVAMISASIDMLNHLGHKEHANVIQEAVYQTIVNDAIRTPDIGGTNSSTDVVENILKILSAKRV 391
            ||.||:.::.:||.||..:.|:::|.:||.:.|....:||.|:||.:::||.:::::..|.    
Mouse   320 NPTAMLLSATNMLRHLNLEYHSSMIADAVKKVIKAGKVRTRDMGGYSTTTDFIKSVIGHLH---- 380

  Fly   392 NWPHG 396
              |||
Mouse   381 --PHG 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 146/333 (44%)
Idh3bNP_570954.1 Iso_dh 46..379 CDD:351095 146/332 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53770
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101342
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R585
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

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