DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5028 and idh3b

DIOPT Version :9

Sequence 1:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster
Sequence 2:XP_031750449.1 Gene:idh3b / 100144949 XenbaseID:XB-GENE-5825105 Length:381 Species:Xenopus tropicalis


Alignment Length:384 Identity:160/384 - (41%)
Similarity:239/384 - (62%) Gaps:22/384 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LRLTQRLLQTQTPFLTRGYPLLVTKEKTEDVAHTKSALQKKVTGTDIPSAQYGGRHAVTMLPGGG 67
            ||.||..|..|.....|  ||.           |...:|:...|      :..|...|||:||.|
 Frog     8 LRSTQSQLYPQISLARR--PLC-----------TSPLVQQAEPG------KSDGAFHVTMIPGDG 53

  Fly    68 IGPELMGYVREIFRYCGAPIDFEVIDID--PSTEGNDDLDYAITSIKRNGVALKGNIETKSQSLT 130
            :|||||..|||:|:....|::|:...:.  .:....:.||..:.|::.|.||:||.|.|..:...
 Frog    54 VGPELMHSVREVFKAADVPVEFDEHHLSEVQNMASKEKLDEVLASMQANKVAIKGKIHTPMEYKG 118

  Fly   131 EV-SRNVAIRNELDLYVNVVHCKSYPGIPARHHDIDVVLIRQNTDGEYAMLEHESVPGIVESMKV 194
            |: |..:.:|.:|||:.||||..|.||...||:::|:|:||:.|:|||:.||||||.|::|.:|:
 Frog   119 ELASYEMRLRRKLDLFANVVHVNSLPGYKTRHNNLDLVIIREQTEGEYSSLEHESVSGVIECLKI 183

  Fly   195 VTVENAERVARYAFEFARQNNRKKVTTIHKANIMKLSDGLFLEVANRVHKDYPELEHNNMIIDNT 259
            :|.|.:.|:|::||::|.:..|.|||.:||||||||.|||||:....|.:.||:::.:.|||||.
 Frog   184 ITREKSNRIAKFAFDYATKKGRSKVTAVHKANIMKLGDGLFLQCCKEVAQLYPKIQFDTMIIDNC 248

  Fly   260 CMQSVSNPHQFDVMNMTNLYGTIVSNVLCGLMGGAGLISGRNYGDHYAIFEPGTRNTGTAIAGKN 324
            |||.|.||:||||:.|.||||.|:.|:..||:||||::.|.:|...||:||.|.|:......|:|
 Frog   249 CMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRN 313

  Fly   325 IANPVAMISASIDMLNHLGHKEHANVIQEAVYQTIVNDAIRTPDIGGTNSSTDVVENIL 383
            ||||.||:.::.:||.||..:.|:|:|.:||.:.|....:||.|:||.:::||.::.::
 Frog   314 IANPTAMLLSATNMLRHLNLEYHSNLISDAVKKVIKQGKVRTRDMGGYSTTTDFIKAVI 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 148/332 (45%)
idh3bXP_031750449.1 Iso_dh 42..375 CDD:412380 148/331 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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