DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4743 and SAMC2

DIOPT Version :9

Sequence 1:NP_651415.1 Gene:CG4743 / 43101 FlyBaseID:FBgn0039357 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_564436.4 Gene:SAMC2 / 840304 AraportID:AT1G34065 Length:345 Species:Arabidopsis thaliana


Alignment Length:290 Identity:106/290 - (36%)
Similarity:162/290 - (55%) Gaps:13/290 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SAAGSVAIKMQEPVNKLK-FFHALVAGGVAGMVVDIALFPIDTVKTRLQSELGFWRAGG---FRG 69
            ::..::.:|..:|.:.|: .:.:|:.||:||:||:.||:||||:|||:|..    |.||   ::|
plant    59 NSCAAICVKQDDPCHFLRVLYESLITGGLAGVVVEAALYPIDTIKTRIQVA----RDGGKIIWKG 119

  Fly    70 IYKGLAPAAAGSAPTAALFFCTYECGKQFLSSVTQTKDSPYVHMAAASAAEVLACLIRVPVEIAK 134
            :|.||.....|..|.:||||..||..||.|..|.....|...|:||.:....::.::|||.|:.|
plant   120 LYSGLGGNLVGVLPASALFFGVYEPTKQKLLKVLPDNLSAVAHLAAGALGGAVSSIVRVPTEVVK 184

  Fly   135 QRSQTLQGNKQSGLQILLRAYRTEGLKRGLYRGFGSTIMREIPFSLIQFPLWEYFKLQWTPLTGF 199
            ||.||  |...|....:......||. .|:|.|:||.::|::||..:||.::|..::.:......
plant   185 QRMQT--GQFVSAPDAVRLIIAKEGF-GGMYAGYGSFLLRDLPFDALQFCVYEQLRIGYKLAARR 246

  Fly   200 DSTPFSVALCGAVAGGISAGLTTPLDVVKTRIMLAERESLNRRRSARRILHGIYLERGFSGLFAG 264
            |......|:.||.||.::..|||||||:|||:|:  :.|..:.:.....:..|..|.|.|.|:.|
plant   247 DLNDPENAMIGAFAGAVTGVLTTPLDVIKTRLMV--QGSGTQYKGVSDCIKTIIREEGSSALWKG 309

  Fly   265 FVPRVLWITLGGAFFFGFYDLTTRILGATS 294
            ..||||||.:||:.|||..:.|.:||...|
plant   310 MGPRVLWIGIGGSIFFGVLEKTKQILSERS 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4743NP_651415.1 Mito_carr 23..99 CDD:278578 35/79 (44%)
PTZ00168 25..281 CDD:185494 98/259 (38%)
Mito_carr 199..291 CDD:278578 37/91 (41%)
SAMC2NP_564436.4 Mito_carr 78..153 CDD:278578 35/78 (45%)
PTZ00168 79..328 CDD:185494 99/257 (39%)
Mito_carr 155..237 CDD:278578 28/84 (33%)
Mito_carr 247..339 CDD:278578 38/93 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I3437
eggNOG 1 0.900 - - E1_KOG0768
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I1546
OMA 1 1.010 - - QHG53824
OrthoDB 1 1.010 - - D1538959at2759
OrthoFinder 1 1.000 - - FOG0004001
OrthoInspector 1 1.000 - - otm2968
orthoMCL 1 0.900 - - OOG6_102662
Panther 1 1.100 - - LDO PTHR45667
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2764
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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