DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4743 and SAMC1

DIOPT Version :9

Sequence 1:NP_651415.1 Gene:CG4743 / 43101 FlyBaseID:FBgn0039357 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001190968.1 Gene:SAMC1 / 830101 AraportID:AT4G39460 Length:325 Species:Arabidopsis thaliana


Alignment Length:282 Identity:110/282 - (39%)
Similarity:151/282 - (53%) Gaps:13/282 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SVAIKMQEPVNKLK-FFHALVAGGVAGMVVDIALFPIDTVKTRLQSELGFWRAGG---FRGIYKG 73
            ||..:..:|.:..: .|...:|||.||:||:.||:||||:|||||:.    |.||   .:|:|.|
plant    39 SVNTQEDKPFDFFRTLFEGFIAGGTAGVVVETALYPIDTIKTRLQAA----RGGGKIVLKGLYSG 99

  Fly    74 LAPAAAGSAPTAALFFCTYECGKQFLSSVTQTKDSPYVHMAAASAAEVLACLIRVPVEIAKQRSQ 138
            ||...||..|.:|||...||..||.|........|...|:.|.:...:.|.|||||.|:.|||.|
plant   100 LAGNIAGVLPASALFVGVYEPTKQKLLKTFPDHLSAVAHLTAGAIGGLAASLIRVPTEVVKQRMQ 164

  Fly   139 TLQGNKQSGLQILLRAYRTEGLKRGLYRGFGSTIMREIPFSLIQFPLWEYFKLQWTPLTGFDSTP 203
            |  |...|....:......||. ||||.|:.|.::|::||..|||.::|...|.:......:.:.
plant   165 T--GQFTSAPSAVRMIASKEGF-RGLYAGYRSFLLRDLPFDAIQFCIYEQLCLGYKKAARRELSD 226

  Fly   204 FSVALCGAVAGGISAGLTTPLDVVKTRIMLAERESLNRRRSARRILHGIYLERGFSGLFAGFVPR 268
            ...||.||.||.::..:||||||:|||:|:  :.|..:.:.....:..|..|.|...|..|..||
plant   227 PENALIGAFAGALTGAVTTPLDVIKTRLMV--QGSAKQYQGIVDCVQTIVREEGAPALLKGIGPR 289

  Fly   269 VLWITLGGAFFFGFYDLTTRIL 290
            ||||.:||:.|||..:.|.|.|
plant   290 VLWIGIGGSIFFGVLESTKRTL 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4743NP_651415.1 Mito_carr 23..99 CDD:278578 37/79 (47%)
PTZ00168 25..281 CDD:185494 102/259 (39%)
Mito_carr 199..291 CDD:278578 36/92 (39%)
SAMC1NP_001190968.1 PTZ00168 55..304 CDD:185494 104/257 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I3437
eggNOG 1 0.900 - - E1_KOG0768
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6834
Inparanoid 1 1.050 170 1.000 Inparanoid score I1546
OMA 1 1.010 - - QHG53824
OrthoDB 1 1.010 - - D1538959at2759
OrthoFinder 1 1.000 - - FOG0004001
OrthoInspector 1 1.000 - - otm2968
orthoMCL 1 0.900 - - OOG6_102662
Panther 1 1.100 - - O PTHR45667
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2764
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.