DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4743 and SAMC1

DIOPT Version :10

Sequence 1:NP_651415.1 Gene:CG4743 / 43101 FlyBaseID:FBgn0039357 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_568060.1 Gene:SAMC1 / 830101 AraportID:AT4G39460 Length:325 Species:Arabidopsis thaliana


Alignment Length:282 Identity:110/282 - (39%)
Similarity:151/282 - (53%) Gaps:13/282 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SVAIKMQEPVNKLK-FFHALVAGGVAGMVVDIALFPIDTVKTRLQSELGFWRAGG---FRGIYKG 73
            ||..:..:|.:..: .|...:|||.||:||:.||:||||:|||||:.    |.||   .:|:|.|
plant    39 SVNTQEDKPFDFFRTLFEGFIAGGTAGVVVETALYPIDTIKTRLQAA----RGGGKIVLKGLYSG 99

  Fly    74 LAPAAAGSAPTAALFFCTYECGKQFLSSVTQTKDSPYVHMAAASAAEVLACLIRVPVEIAKQRSQ 138
            ||...||..|.:|||...||..||.|........|...|:.|.:...:.|.|||||.|:.|||.|
plant   100 LAGNIAGVLPASALFVGVYEPTKQKLLKTFPDHLSAVAHLTAGAIGGLAASLIRVPTEVVKQRMQ 164

  Fly   139 TLQGNKQSGLQILLRAYRTEGLKRGLYRGFGSTIMREIPFSLIQFPLWEYFKLQWTPLTGFDSTP 203
            |  |...|....:......||. ||||.|:.|.::|::||..|||.::|...|.:......:.:.
plant   165 T--GQFTSAPSAVRMIASKEGF-RGLYAGYRSFLLRDLPFDAIQFCIYEQLCLGYKKAARRELSD 226

  Fly   204 FSVALCGAVAGGISAGLTTPLDVVKTRIMLAERESLNRRRSARRILHGIYLERGFSGLFAGFVPR 268
            ...||.||.||.::..:||||||:|||:|:  :.|..:.:.....:..|..|.|...|..|..||
plant   227 PENALIGAFAGALTGAVTTPLDVIKTRLMV--QGSAKQYQGIVDCVQTIVREEGAPALLKGIGPR 289

  Fly   269 VLWITLGGAFFFGFYDLTTRIL 290
            ||||.:||:.|||..:.|.|.|
plant   290 VLWIGIGGSIFFGVLESTKRTL 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4743NP_651415.1 PTZ00168 25..281 CDD:185494 102/259 (39%)
SAMC1NP_568060.1 PTZ00168 55..304 CDD:185494 104/257 (40%)

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