DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4743 and mtm1

DIOPT Version :10

Sequence 1:NP_651415.1 Gene:CG4743 / 43101 FlyBaseID:FBgn0039357 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_595818.1 Gene:mtm1 / 2541312 PomBaseID:SPBP23A10.06 Length:335 Species:Schizosaccharomyces pombe


Alignment Length:350 Identity:86/350 - (24%)
Similarity:134/350 - (38%) Gaps:91/350 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AAELGLESAAGSVAIKMQEPVNKLKFFHALVAGGVAGMVVDIALFPIDTVKTRLQSE-------- 58
            ||..|:|:.....|....:|:.|      :::..|..::..:.:.|:|.||||||||        
pombe     5 AATEGVEADLSVNAEPDVKPIAK------MLSACVGSVITTLTVTPLDVVKTRLQSESISQYSST 63

  Fly    59 --------LGFWRAG------------------GFRGIYKGLAPAAAGSAPTAALFFCTYECGKQ 97
                    ||..|..                  |.|.:::||.|:.....|...:.|..||   |
pombe    64 QPISSAKILGKGRPAPKPLGGPVSGLYQIARHEGVRSLWRGLVPSLTMLLPANTVQFLGYE---Q 125

  Fly    98 FLSSVTQTKDSPYVHMAAASAAEVLACLIRVPVEIAKQRSQTLQGNKQSGLQILLRAYRTEGLK- 161
            .|...:.........:|.|||..:.|.::. |:|:.:.|.|.:.|:...|....:.....:||| 
pombe   126 LLPLYSDWGFPAAAAIAGASARTISATIVS-PIELFRTRVQAVGGHYPPGHAREIANEVFDGLKL 189

  Fly   162 ----RG---LYRGFGSTIMREIPFSLIQFPLWEY-----FKLQWTPLTGFDSTPFSVAL-----C 209
                :|   |:.|...|:.|::|||  .|..|.|     |.|....|..|.|:..:..|     .
pombe   190 MIHQKGILNLWSGVSVTLWRDVPFS--AFYWWSYERIRLFLLGHPSLQAFSSSQSTKDLYINFVS 252

  Fly   210 GAVAGGISAGLTTPLDVVKTRIMLAERESLNRRRSARRILHGIYLERGF-----------SGLFA 263
            |.::|.::..||.|.||.||               |::: ||..|.||.           ..|:.
pombe   253 GGISGTLATLLTQPFDVSKT---------------AKQV-HGHTLTRGQFMLTLWKRGGPKALWK 301

  Fly   264 GFVPRVLWITLGGAFFFGFYDLTTR 288
            |.:||.:.:....|.....|.||.:
pombe   302 GTLPRCVKVAPSCAIMISSYHLTKK 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4743NP_651415.1 PTZ00168 25..281 CDD:185494 76/318 (24%)
mtm1NP_595818.1 Mito_carr 21..132 CDD:395101 27/119 (23%)
Mito_carr 148..231 CDD:395101 23/85 (27%)
Mito_carr 242..331 CDD:395101 24/100 (24%)

Return to query results.
Submit another query.