DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4730 and SDD4

DIOPT Version :10

Sequence 1:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_015347.1 Gene:SDD4 / 856133 SGDID:S000006226 Length:1133 Species:Saccharomyces cerevisiae


Alignment Length:66 Identity:18/66 - (27%)
Similarity:31/66 - (46%) Gaps:10/66 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 RFICEFPGCQKSFTSSSSLRNHECTH---------TAMPFECAHCHQSYPARNKLRMHLERKHNM 348
            ||.|..|.|.|:|:....|..|:..|         ..:|...|.|::::..::.|..| |::|:.
Yeast    30 RFRCPHPECNKTFSRQEHLSRHKLNHWPKEIYVCSYVLPTTNAPCNKTFVRKDLLIRH-EKRHSK 93

  Fly   349 V 349
            |
Yeast    94 V 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4730NP_651413.1 zf-AD 46..124 CDD:462262
C2H2 Zn finger 183..203 CDD:275368
C2H2 Zn finger 212..232 CDD:275368
C2H2 Zn finger 240..260 CDD:275368
C2H2 Zn finger 268..289 CDD:275368
C2H2 Zn finger 296..318 CDD:275368 7/21 (33%)
C2H2 Zn finger 325..346 CDD:275368 5/20 (25%)
SDD4NP_015347.1 C2H2 Zn finger 33..55 CDD:275368 7/21 (33%)
C2H2 Zn finger 63..91 CDD:275368 6/28 (21%)
Fungal_trans 506..747 CDD:397964
Blue background indicates that the domain is not in the aligned region.

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