DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4730 and AT3G29340

DIOPT Version :10

Sequence 1:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_189580.1 Gene:AT3G29340 / 822592 AraportID:AT3G29340 Length:650 Species:Arabidopsis thaliana


Alignment Length:130 Identity:27/130 - (20%)
Similarity:48/130 - (36%) Gaps:38/130 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 ELVNNLLALKNGPDP--AFLEQEREEQK----RLLEHLHIQQNDLRKQEILGAMTNLLE----NE 375
            :.::.|||.|:|...  |||:.|..::.    ...|.|....:|....::.......::    .|
plant     5 DTLDKLLASKDGLSAFRAFLKSEFSDENLEFWLACEDLKTSTSDQISSKVYDIYCEFIKAESPRE 69

  Fly   376 INIIQNFHNQRDQSSRSILEREYETNNLLNNVFLNYDRNRQDVIDQITCNEDIQKSAVAALIARN 440
            |||   .|..||..:::|.:                        ..|.|.:|.|| .:..|:|::
plant    70 INI---DHKTRDDIAQNITQ------------------------TTIHCFDDAQK-LILCLMAKD 106

  Fly   441  440
            plant   107  106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4730NP_651413.1 zf-AD 46..124 CDD:462262
C2H2 Zn finger 183..203 CDD:275368
C2H2 Zn finger 212..232 CDD:275368
C2H2 Zn finger 240..260 CDD:275368
C2H2 Zn finger 268..289 CDD:275368
C2H2 Zn finger 296..318 CDD:275368
C2H2 Zn finger 325..346 CDD:275368 9/22 (41%)
AT3G29340NP_189580.1 zf-C2H2_6 43..68 CDD:433576 1/24 (4%)
C2H2 Zn finger 45..65 CDD:275368 1/19 (5%)
zf-C2H2_6 98..122 CDD:433576 2/9 (22%)
C2H2 Zn finger 100..120 CDD:275368 2/7 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.