DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4730 and Neu2

DIOPT Version :10

Sequence 1:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster


Alignment Length:162 Identity:35/162 - (21%)
Similarity:47/162 - (29%) Gaps:64/162 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   592 GESVSGTPMATAPSDEGYSPEASGRRRSSSVELGLEVEPTPSTPLS------------------- 637
            |.|:.|.|        |......||.|.|.|..|.::....:..||                   
  Fly   167 GASMGGFP--------GMDQADFGRTRRSRVTKGEDLRYDITLELSEAIFGSEKEFDLTHLETCE 223

  Fly   638 -----GPSAGSVAR-------GGAVISSEPTSPVSGAAPVAQFAECVVCMEQLVQVIFLPCGHMC 690
                 |..|||..|       .|.|:.:|.|       |...|::..:|..              
  Fly   224 ACAGTGAKAGSKMRICSTCGGRGQVMRTEQT-------PFGMFSQVSICPN-------------- 267

  Fly   691 CCSGCHVEIHDCPMC----RAYIERKIKVIQP 718
            |.....|...:|..|    |..|::.|||..|
  Fly   268 CGGDGEVISENCRKCSGEGRVRIKKSIKVKIP 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4730NP_651413.1 zf-AD 46..124 CDD:462262
C2H2 Zn finger 183..203 CDD:275368
C2H2 Zn finger 212..232 CDD:275368
C2H2 Zn finger 240..260 CDD:275368
C2H2 Zn finger 268..289 CDD:275368
C2H2 Zn finger 296..318 CDD:275368
C2H2 Zn finger 325..346 CDD:275368
Neu2NP_649316.1 zf-AD 1..63 CDD:462262
COG5048 <119..241 CDD:227381 18/81 (22%)
C2H2 Zn finger 121..141 CDD:275368
zf-H2C2_2 133..156 CDD:463886
C2H2 Zn finger 149..169 CDD:275368 1/1 (100%)
zf-H2C2_2 162..185 CDD:463886 7/25 (28%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 0/19 (0%)
zf-C2H2_8 206..286 CDD:464935 16/100 (16%)
C2H2 Zn finger 233..253 CDD:275368 5/19 (26%)
C2H2 Zn finger 260..297 CDD:275368 9/50 (18%)
C2H2 Zn finger 303..323 CDD:275368
C2H2 Zn finger 353..373 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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