DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4730 and Meics

DIOPT Version :10

Sequence 1:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster


Alignment Length:437 Identity:104/437 - (23%)
Similarity:158/437 - (36%) Gaps:134/437 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DPQTSKVCQTL-----NFTIARRTAEAPVKLVSHEVSLSDSTTSLELSNCCRLCLEEPYPNQM-- 59
            |....|:|.|.     |....|...|...:..|..:.|..|.::|..|:|.|..:....|.::  
  Fly    61 DEMPQKICPTCLVAAQNAFHFRHKCEQSFQFFSQLLQLDKSNSNLSRSHCRRGTMNPLIPFEIVG 125

  Fly    60 ----LDMTVIYDQEAALSYYDCYEICTKEDLRQNPKNEPRTLCKRCAVELKWAYDFHKKMAIANQ 120
                ||..|                 ||.|     .|.|         ::|...|........|.
  Fly   126 CEDPLDTNV-----------------TKLD-----ANRP---------DVKTDIDEPTDGKATNG 159

  Fly   121 Q----LREIFVATEANTEQEDDVE---------DEENEADMNEEFLMEEIEEKQETPIDSLED-- 170
            |    |:|:|..|..:.:.||:|.         ||||:.:..:    .|.|:..:..:.|.||  
  Fly   160 QESEPLQEVFEITMNDIKTEDEVSIQETFEDAFDEENDNNNTD----SEREDSDQWTVGSTEDQD 220

  Fly   171 -----------IVPRN--------------------RHTGKSN----------CKFCHKEFRNHS 194
                       .|..|                    ||..|..          |.||.:.||.::
  Fly   221 EPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFRTNA 285

  Fly   195 RMAKHQMIHLANRP---------------------------NFRCSQCDRVYLTKQALKVHVDSK 232
            ::..|:..|...||                           ..:|.|||:.:.|:..|:.|:...
  Fly   286 QLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQRH 350

  Fly   233 HRQSGVHCDTCGKVFAIAKALEIHKRYHNRDFPYSCDLCDRRFAQRSHLTVHQQVKHSGSR-FIC 296
            ..:....|..|.:.||....|::|.|.|..:.|:.|:||.:.|.|..||..|.:| |:|.| |.|
  Fly   351 TGERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRV-HNGDRQFKC 414

  Fly   297 EFPGCQKSFTSSSSLRNHECTHTAM-PFECAHCHQSYPARNKLRMHL 342
              |.|.|||...|::..|:.||:.: ||:|..|.|::...:.|:.||
  Fly   415 --PDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHL 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4730NP_651413.1 zf-AD 46..124 CDD:462262 16/87 (18%)
C2H2 Zn finger 183..203 CDD:275368 6/19 (32%)
C2H2 Zn finger 212..232 CDD:275368 7/19 (37%)
C2H2 Zn finger 240..260 CDD:275368 7/19 (37%)
C2H2 Zn finger 268..289 CDD:275368 9/20 (45%)
C2H2 Zn finger 296..318 CDD:275368 8/21 (38%)
C2H2 Zn finger 325..346 CDD:275368 6/18 (33%)
MeicsNP_524062.1 zf-AD 20..95 CDD:462262 8/33 (24%)
C2H2 Zn finger 242..262 CDD:275368 2/19 (11%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
SFP1 <296..374 CDD:227516 14/77 (18%)
COG5048 <299..486 CDD:227381 48/164 (29%)
C2H2 Zn finger 302..322 CDD:275368 0/19 (0%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 9/20 (45%)
COG5048 <395..583 CDD:227381 27/68 (40%)
C2H2 Zn finger 414..434 CDD:275368 8/21 (38%)
C2H2 Zn finger 442..462 CDD:275368 6/18 (33%)
C2H2 Zn finger 470..486 CDD:275368
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
Blue background indicates that the domain is not in the aligned region.

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