| Sequence 1: | NP_651413.1 | Gene: | CG4730 / 43099 | FlyBaseID: | FBgn0039355 | Length: | 392 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_648109.1 | Gene: | CTCF / 38817 | FlyBaseID: | FBgn0035769 | Length: | 818 | Species: | Drosophila melanogaster |
| Alignment Length: | 321 | Identity: | 82/321 - (25%) |
|---|---|---|---|
| Similarity: | 135/321 - (42%) | Gaps: | 71/321 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 87 RQN---PKNEPRTLCKRCAVELKWAYDFHKKMA-IANQQLREIFVATEANT-----------EQE 136
Fly 137 DDVEDEENEADMNE-EFLMEEIEEKQETPIDSLEDIVPRNRHTGKSNCKFC----HKEF--RNHS 194
Fly 195 RMAKHQMIHLANRPNFRCSQCDRVYLTKQALKVHVDSKHRQSGVH-CDTCGKVFAIAKALEIHKR 258
Fly 259 Y-HNRDFPYSCDLCDRRFAQ----RSHLTVH-----------------------QQVKHSG-SRF 294
Fly 295 ICEFPGCQKSFTSSSSLRNHECTHTAMP---FECAHCHQSYPARNKLRMHLERKHNMVVQM 352 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG4730 | NP_651413.1 | zf-AD | 46..124 | CDD:462262 | 11/40 (28%) |
| C2H2 Zn finger | 183..203 | CDD:275368 | 8/25 (32%) | ||
| C2H2 Zn finger | 212..232 | CDD:275368 | 6/19 (32%) | ||
| C2H2 Zn finger | 240..260 | CDD:275368 | 7/20 (35%) | ||
| C2H2 Zn finger | 268..289 | CDD:275368 | 7/47 (15%) | ||
| C2H2 Zn finger | 296..318 | CDD:275368 | 8/21 (38%) | ||
| C2H2 Zn finger | 325..346 | CDD:275368 | 5/20 (25%) | ||
| CTCF | NP_648109.1 | FAP | 116..>202 | CDD:429334 | 6/11 (55%) |
| C2H2 Zn finger | 296..316 | CDD:275368 | 7/21 (33%) | ||
| COG5048 | 321..>621 | CDD:227381 | 45/177 (25%) | ||
| C2H2 Zn finger | 324..344 | CDD:275368 | 6/20 (30%) | ||
| C2H2 Zn finger | 352..373 | CDD:275368 | 7/20 (35%) | ||
| C2H2 Zn finger | 381..401 | CDD:275368 | 5/19 (26%) | ||
| zf-H2C2_2 | 394..415 | CDD:463886 | 4/20 (20%) | ||
| C2H2 Zn finger | 409..429 | CDD:275368 | 1/19 (5%) | ||
| zf-H2C2_2 | 422..446 | CDD:463886 | 6/25 (24%) | ||
| C2H2 Zn finger | 437..457 | CDD:275368 | 8/21 (38%) | ||
| C2H2 Zn finger | 467..485 | CDD:275368 | 5/17 (29%) | ||
| C2H2 Zn finger | 496..516 | CDD:275370 | |||
| C2H2 Zn finger | 524..544 | CDD:275368 | |||
| zf-H2C2_2 | 536..561 | CDD:463886 | |||
| C2H2 Zn finger | 552..573 | CDD:275368 | |||
| zf-C2H2 | 587..609 | CDD:395048 | |||
| C2H2 Zn finger | 589..609 | CDD:275368 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||