DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4730 and CG12605

DIOPT Version :10

Sequence 1:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster


Alignment Length:397 Identity:89/397 - (22%)
Similarity:158/397 - (39%) Gaps:84/397 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QTLNFTIARRTAEAPVKLV---SHEVSLSDSTTSLELSNCCRLCLEEPYPNQMLDMTVIYDQEAA 71
            |.::.:.:.|:.::.::.:   |:::....|..:   :||..|.......:..:|:.:....|:.
  Fly   283 QEISNSASSRSPQSTIRFIGSSSYDLMGGSSEGA---NNCSPLTPPNSDHSSDVDIDMSSSSESG 344

  Fly    72 LSYYDCYEICTKEDLRQNP-KNEPR-TLCKRCAVELKWAYDFHKKMAIANQQLREIFVATEANTE 134
            |..:.          :.|| :|:.| :..|.|...|.......|..|:..|             :
  Fly   345 LQQWG----------KPNPQQNQQRASALKMCLNMLDGRTKASKAAAVTKQ-------------D 386

  Fly   135 QEDDVEDEENEADMNEEFLMEEIEEKQETPIDSL--------EDIVPRNRHTGKSNCKFCHKEFR 191
            :::.::.....|..|.........|..|.|..||        |:...|.|  |...|..|.|::.
  Fly   387 RQEPMQPRPKSAQSNASSGGGPPSEPPENPAASLGHSSSGNGENYAKRKR--GCYKCCECGKQYA 449

  Fly   192 NHSRMAKHQMIH--LANRPNFRCSQCDRVYLTKQALKVHVDSKHRQSGVH-CDTCGKVFAIAKAL 253
            ..|.:::|:..|  |.::...:|:.|.:.|::..||.:|: ..|:.|  | ||.|||:|:....|
  Fly   450 TSSNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMPALAMHL-LTHKLS--HSCDICGKLFSRPWLL 511

  Fly   254 EIHKRYHNRDFPYSCDLCDRRFAQRSHLTVHQQVKHSGSRFICEFPGCQKSFTSSSSLRNHECTH 318
            :.|.|.|..:.||:|..|.:.||.||:|..|.|. |||.:                         
  Fly   512 QGHLRSHTGEKPYACVHCGKAFADRSNLRAHMQT-HSGDK------------------------- 550

  Fly   319 TAMPFECAHCHQSYPARNKLRMHLE----RKHNMVVQMEDLEEMRKFHIVRSKLVMAKIYSDQKE 379
               .|:|..|::::..::.|..|||    |....:.|.:.|||.......:.:|.|    .|:.|
  Fly   551 ---NFKCHRCNKTFALKSYLNKHLESACLRDAGAIDQGKGLEEEDDDCSKQDELEM----GDELE 608

  Fly   380 SHHAKND 386
            |.....|
  Fly   609 SDENSQD 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4730NP_651413.1 zf-AD 46..124 CDD:462262 15/79 (19%)
C2H2 Zn finger 183..203 CDD:275368 5/19 (26%)
C2H2 Zn finger 212..232 CDD:275368 6/19 (32%)
C2H2 Zn finger 240..260 CDD:275368 9/19 (47%)
C2H2 Zn finger 268..289 CDD:275368 9/20 (45%)
C2H2 Zn finger 296..318 CDD:275368 0/21 (0%)
C2H2 Zn finger 325..346 CDD:275368 7/24 (29%)
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 74/337 (22%)
zf-C2H2 439..461 CDD:395048 5/21 (24%)
C2H2 Zn finger 441..461 CDD:275370 5/19 (26%)
C2H2 Zn finger 472..492 CDD:275368 6/20 (30%)
zf-C2H2 496..518 CDD:395048 10/21 (48%)
C2H2 Zn finger 498..518 CDD:275368 9/19 (47%)
zf-H2C2_2 511..534 CDD:463886 8/22 (36%)
zf-C2H2 524..546 CDD:395048 10/22 (45%)
C2H2 Zn finger 526..546 CDD:275368 9/20 (45%)
zf-H2C2_2 538..562 CDD:463886 9/52 (17%)
C2H2 Zn finger 554..571 CDD:275368 3/16 (19%)

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