DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4730 and sna

DIOPT Version :9

Sequence 1:	NP_001262965.1	Gene:	CG4730 / 43099	FlyBaseID:	FBgn0039355	Length:	392	Species:	Drosophila melanogaster
Sequence 2:	NP_476732.1	Gene:	sna / 34908	FlyBaseID:	FBgn0003448	Length:	390	Species:	Drosophila melanogaster

Alignment Length:	146	Identity:	46/146 - (31%)
Similarity:	66/146 - (45%)	Gaps:	13/146 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly   183 CKFCHKEFRNHSRMAKHQMIHL------ANRPNFRCSQCDRVYLTKQALKVHVDSKHRQSGVHCD 241
            |..|.|.:.....::||:..|.      ..:....|.:|.::|.|..|||:|:  :.......|.
  Fly   247 CDECQKMYSTSMGLSKHRQFHCPAAECNQEKKTHSCEECGKLYTTIGALKMHI--RTHTLPCKCP 309

  Fly   242 TCGKVFAIAKALEIHKRYHNRDFPYSCDLCDRRFAQRSHLTVHQQVKHSGSRFICEFPGCQKSFT 306
            .|||.|:....|:.|.|.|..:.|:.|..|.|.||.||:|..|||......::.|:.  |.|||:
  Fly   310 ICGKAFSRPWLLQGHIRTHTGEKPFQCPDCPRSFADRSNLRAHQQTHVDVKKYACQV--CHKSFS 372

  Fly   307 SSSSLRNH---ECTHT 319
            ..|.|..|   .||.|
  Fly   373 RMSLLNKHSSSNCTIT 388

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4730	NP_001262965.1	zf-AD	46..124	CDD:285071
		C2H2 Zn finger	183..203	CDD:275368	5/19 (26%)
		C2H2 Zn finger	212..232	CDD:275368	8/19 (42%)
		C2H2 Zn finger	240..260	CDD:275368	8/19 (42%)
		C2H2 Zn finger	268..289	CDD:275368	11/20 (55%)
		C2H2 Zn finger	296..318	CDD:275368	9/24 (38%)
		C2H2 Zn finger	325..346	CDD:275368
sna	NP_476732.1	C2H2 Zn finger	308..328	CDD:275368	8/19 (42%)
		zf-H2C2_2	321..344	CDD:290200	8/22 (36%)
		zf-C2H2	334..356	CDD:278523	11/21 (52%)
		C2H2 Zn finger	336..356	CDD:275368	11/19 (58%)
		zf-H2C2_2	348..373	CDD:290200	9/26 (35%)
		C2H2 Zn finger	364..380	CDD:275368	7/17 (41%)
		C2H2 Zn finger	247..267	CDD:275368	5/19 (26%)
		C2H2 Zn finger	282..302	CDD:275368	8/21 (38%)
		zf-C2H2	306..328	CDD:278523	8/21 (38%)
		COG5048	307..>356	CDD:227381	21/48 (44%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45468411
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930