DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4730 and wor

DIOPT Version :9

Sequence 1:NP_001262965.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster


Alignment Length:323 Identity:80/323 - (24%)
Similarity:124/323 - (38%) Gaps:77/323 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LEEPYPNQMLDMTVIYDQEAALSYYDCYEICTKEDLRQNPKNEPRTLCKRCAV--------ELKW 107
            :||...||  |:..:..:.:...||.|.:                  |.:|..        :...
  Fly   246 MEEDQENQ--DINQLKIKSSNDLYYQCQQ------------------CNKCYATYAGLVKHQQTH 290

  Fly   108 AYDFHKKMAIANQQ--LREIFVATEANTEQEDDVEDEENEADMNEEFLMEEIEEKQETPIDSLED 170
            ||:..:...|.:|.  ...|...||..|:|...:....|.|.          .:..:.|:.    
  Fly   291 AYESTEYKIIRSQPGGSGAIVDQTEFCTDQASALIQAANVAS----------AQSMQKPVG---- 341

  Fly   171 IVPRNRHTGKSNCKFCHKEFRNHSRMAKHQMIHLAN------RPNFRCSQCDRVYLTKQALKVHV 229
             |||      .:|:.|.|.:..:|.::|||..|..:      :..|.|..||:.|::..|||:|:
  Fly   342 -VPR------YHCQDCGKSYSTYSGLSKHQQFHCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHI 399

  Fly   230 DSKHRQSGVHCDTCGKVFAIAKALEIHKRYHNRDFPYSCDLCDRRFAQRSHLTVHQQVKHSGSRF 294
              :.......|..|||.|:....|:.|.|.|..:.|:||..|:|.||.||:|..|.|......::
  Fly   400 --RTHTLPCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKY 462

  Fly   295 ICEFPGCQKSFTSSSSLRNHECTHTAMPFECAHCHQSYPA-------RNKLRMHL---ERKHN 347
            .|  |.|.|||:..|.|..|      :...|.......|:       :.:|:.||   |..||
  Fly   463 SC--PTCTKSFSRMSLLAKH------LQSGCQTEQSGGPSGSGGGFDQQQLQQHLQVYEEGHN 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4730NP_001262965.1 zf-AD 46..124 CDD:285071 14/82 (17%)
C2H2 Zn finger 183..203 CDD:275368 7/19 (37%)
C2H2 Zn finger 212..232 CDD:275368 8/19 (42%)
C2H2 Zn finger 240..260 CDD:275368 8/19 (42%)
C2H2 Zn finger 268..289 CDD:275368 10/20 (50%)
C2H2 Zn finger 296..318 CDD:275368 9/21 (43%)
C2H2 Zn finger 325..346 CDD:275368 6/30 (20%)
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 3/37 (8%)
C2H2 Zn finger 317..334 CDD:275368 4/26 (15%)
zf-C2H2 345..367 CDD:278523 7/21 (33%)
C2H2 Zn finger 347..367 CDD:275368 7/19 (37%)
PHA00732 379..>417 CDD:177300 14/39 (36%)
C2H2 Zn finger 382..402 CDD:275368 8/21 (38%)
zf-C2H2_8 405..482 CDD:292531 30/84 (36%)
zf-C2H2 406..428 CDD:278523 8/21 (38%)
C2H2 Zn finger 408..428 CDD:275368 8/19 (42%)
zf-H2C2_2 421..444 CDD:290200 9/22 (41%)
zf-C2H2 434..456 CDD:278523 11/21 (52%)
C2H2 Zn finger 436..456 CDD:275368 10/19 (53%)
zf-H2C2_2 448..473 CDD:290200 9/26 (35%)
C2H2 Zn finger 464..481 CDD:275368 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457217
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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