DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4730 and CG4496

DIOPT Version :10

Sequence 1:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_609101.1 Gene:CG4496 / 34000 FlyBaseID:FBgn0031894 Length:580 Species:Drosophila melanogaster


Alignment Length:368 Identity:77/368 - (20%)
Similarity:112/368 - (30%) Gaps:149/368 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 EEPYPNQMLDMTVIYDQEAALSYYDCYEICTK-----EDL---RQNPKNEPRTLC---------- 98
            |.|:|                    | ::|.:     .||   |:...::|:.:|          
  Fly   270 ERPFP--------------------C-DLCERRFREFSDLKKHRRRHSHDPQFICMICHLGAPLE 313

  Fly    99 ---KRCAVELKWAYDFHKKMAIANQQLREIFVATEANTEQEDDVEDEENEADMNEEFLMEEIEEK 160
               .|||       |...|..:...|..|:   .|..||:..|  :.|.:.|..||..:|..::.
  Fly   314 QDSTRCA-------DCESKNLMVKPQPEEL---GEKTTEEHSD--EMEGDDDEIEEAALENEKQP 366

  Fly   161 QET-----------PIDSLEDIVPRNRHT---------------------------GKS------ 181
            |..           ||.|..:.||  .||                           |||      
  Fly   367 QVATQPSLMVTLIPPIQSPPEKVP--SHTQPSRPPLPRSCSSANSSSSLSNDGNIAGKSMSRTRR 429

  Fly   182 --NCKFCHKEFRNHSRMAKHQMIHLANRPNFRCSQCDRVYLTKQALKVHVDSKHRQSGVHCDTCG 244
              .|..||:.|.....:.:|.|||...:| |.||:|.:.:.....||.|:.:             
  Fly   430 SYPCPLCHRPFGTRHNLKRHYMIHTGEKP-FSCSKCRKPFRECSTLKKHMVT------------- 480

  Fly   245 KVFAIAKALEIHKRYHNRDFPYSCDLCDRRFAQ----RSHLTVHQQVKHSGSRFICEFPGCQKSF 305
                           |.||..|.|..|..:|..    ..|...||....|....|.|     ...
  Fly   481 ---------------HVRDRWYKCLRCPSKFRDYLEYSDHKNNHQDQLSSRKSSIYE-----SDD 525

  Fly   306 TSSSSLRNHECTHTAMPFECAHCHQSYPARNKLRMHLERKHNM 348
            ...||:  .:|      .||..|.|.:...:....|| :||::
  Fly   526 DGDSSV--EDC------LECCECQQRFTELDAYTAHL-KKHDL 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4730NP_651413.1 zf-AD 46..124 CDD:462262 16/92 (17%)
C2H2 Zn finger 183..203 CDD:275368 6/19 (32%)
C2H2 Zn finger 212..232 CDD:275368 6/19 (32%)
C2H2 Zn finger 240..260 CDD:275368 0/19 (0%)
C2H2 Zn finger 268..289 CDD:275368 6/24 (25%)
C2H2 Zn finger 296..318 CDD:275368 4/21 (19%)
C2H2 Zn finger 325..346 CDD:275368 5/20 (25%)
CG4496NP_609101.1 SFP1 <208..298 CDD:227516 8/48 (17%)
zf-C2H2 245..267 CDD:395048
C2H2 Zn finger 247..267 CDD:275368
zf-H2C2_2 259..282 CDD:463886 5/32 (16%)
C2H2 Zn finger 275..295 CDD:275368 5/20 (25%)
zf-C2H2 431..453 CDD:395048 6/21 (29%)
C2H2 Zn finger 433..453 CDD:275368 6/19 (32%)
zf-H2C2_2 445..466 CDD:463886 9/21 (43%)
C2H2 Zn finger 461..481 CDD:275368 6/47 (13%)
C2H2 Zn finger 489..510 CDD:275368 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.