DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4730 and CG17612

DIOPT Version :10

Sequence 1:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster


Alignment Length:411 Identity:95/411 - (23%)
Similarity:147/411 - (35%) Gaps:140/411 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 CRLCLEEPYPNQMLDMTVIYDQ--------EAALSYYDCYEICTKEDLRQNPKNEPRTLCKRCAV 103
            ||:|||     |..::|.|:|.        ...||.|....:       :...:....:|..|..
  Fly   187 CRVCLE-----QSDNLTNIFDDAHQYGIPIATILSQYTGMPV-------EKGDSFSEYICVTCLD 239

  Fly   104 ELKWAYDFHKKMAIANQQLREIFVATEANTEQEDDVEDEENEADMNEEFLMEEIEEKQETPIDSL 168
            .:|.|:                           ||:|.:||...|..       :.|:|  |..:
  Fly   240 VVKNAF---------------------------DDLESKENTIQMYR-------QPKEE--IIDI 268

  Fly   169 EDIVPRNRH-----TGK--SNCKFCHKEFRNHSRMAKHQMIHLANR----PNFRCSQCDRVYLTK 222
            :.|..:|:.     |||  ..|..|.|.|...:::..|...|...|    |..:|..|..:|:.:
  Fly   269 DSIPVKNKPVDYEVTGKPPHRCPQCPKIFLLAAKLQAHIRTHNETRTTEPPRLKCPMCPSIYMKR 333

  Fly   223 QALKVHV----DSKHRQSGV----HCDTCGKVFAIAKALEIHKRYH-------NRDFPYSCDLCD 272
            ..|:.|:    .|..|:|.:    .|..|.|:|..:..||||.:.|       :|...:.|..|.
  Fly   334 GCLEAHMWIHRASDERESELEPPYRCPHCPKLFLYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCA 398

  Fly   273 RRFAQRSHLTVHQQVKHSGSR-FICEFPGCQKSFTSSSSLRNHECTHTAM--------------- 321
            ..|:..|.|..|.:: |:|.| |.|  |.|..||...|:|::|:|.||..               
  Fly   399 DVFSDVSSLKDHVKI-HAGERTFKC--PLCLMSFQEESNLKSHDCAHTRFKCHKCSKFFESQNYL 460

  Fly   322 ------------PFECAHCHQSYPARNKLRMHLERKHNMVVQMEDLEEM------------RKFH 362
                        ||:|..|.|::..||.|:.|:..:    |.::.|...            :||.
  Fly   461 DFHFKKSHTTKGPFKCIKCQQTFQKRNGLKEHISSQ----VCVQFLRSKSPGQIFPCPKCPKKFS 521

  Fly   363 IVRSKLVMAKIYSDQKESHHA 383
            |           .|..:.|||
  Fly   522 I-----------EDNYQMHHA 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4730NP_651413.1 zf-AD 46..124 CDD:462262 16/84 (19%)
C2H2 Zn finger 183..203 CDD:275368 5/19 (26%)
C2H2 Zn finger 212..232 CDD:275368 5/23 (22%)
C2H2 Zn finger 240..260 CDD:275368 8/19 (42%)
C2H2 Zn finger 268..289 CDD:275368 6/20 (30%)
C2H2 Zn finger 296..318 CDD:275368 9/21 (43%)
C2H2 Zn finger 325..346 CDD:275368 7/20 (35%)
CG17612NP_608824.1 zf-AD 187..>246 CDD:462262 16/97 (16%)
C2H2 Zn finger 290..310 CDD:275368 5/19 (26%)
C2H2 Zn finger 323..343 CDD:275370 5/19 (26%)
C2H2 Zn finger 359..379 CDD:275368 8/19 (42%)
C2H2 Zn finger 394..414 CDD:275368 6/20 (30%)
C2H2 Zn finger 422..438 CDD:275368 7/17 (41%)
C2H2 Zn finger 447..463 CDD:275368 0/15 (0%)
C2H2 Zn finger 476..505 CDD:275368 9/32 (28%)
C2H2 Zn finger 513..533 CDD:275368 7/30 (23%)
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 568..584 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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