DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4730 and klf1

DIOPT Version :10

Sequence 1:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_594996.1 Gene:klf1 / 2541685 PomBaseID:SPAC1039.05C Length:781 Species:Schizosaccharomyces pombe


Alignment Length:100 Identity:30/100 - (30%)
Similarity:40/100 - (40%) Gaps:26/100 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 RFICEFPGCQKSFTSSSSLRNHECTHT-AMPFECAHCHQSYPARNKLRMHLERKHNMVVQMEDLE 356
            |:.|:|.||.||||.....|.|..:|| :..|.|.||..|:...:.|..|:.:||  |.|     
pombe    16 RYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH--VKQ----- 73

  Fly   357 EMRKFHIVRSKLVMAKIYSDQKESHHAKNDSAAIS 391
                              :|.....|.|:|...||
pombe    74 ------------------NDAGSQTHPKHDKTLIS 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4730NP_651413.1 zf-AD 46..124 CDD:462262
C2H2 Zn finger 183..203 CDD:275368
C2H2 Zn finger 212..232 CDD:275368
C2H2 Zn finger 240..260 CDD:275368
C2H2 Zn finger 268..289 CDD:275368
C2H2 Zn finger 296..318 CDD:275368 10/21 (48%)
C2H2 Zn finger 325..346 CDD:275368 6/20 (30%)
klf1NP_594996.1 COG5048 17..>255 CDD:227381 28/98 (29%)
C2H2 Zn finger 19..41 CDD:275368 10/21 (48%)
C2H2 Zn finger 49..66 CDD:275368 5/16 (31%)
Fungal_trans 310..574 CDD:397964
Blue background indicates that the domain is not in the aligned region.

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