| Sequence 1: | NP_733115.1 | Gene: | Lgr3 / 43098 | FlyBaseID: | FBgn0039354 | Length: | 765 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001340791.1 | Gene: | lgr4 / 558825 | ZFINID: | ZDB-GENE-111013-1 | Length: | 971 | Species: | Danio rerio |
| Alignment Length: | 833 | Identity: | 184/833 - (22%) |
|---|---|---|---|
| Similarity: | 307/833 - (36%) | Gaps: | 234/833 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 132 CQCGQGTILYC-GRYAKLRRFPR-LSSEVTNLIIIRNNLT-LRDNIFANFTRLQK---------- 183
Fly 184 --------------LTLKYNNISRVPLGSFSGLFHLERLELSHNNVSHLPHGVFLGLHSLQWLFL 234
Fly 235 VNNHLHHLPVEQLRFFRRLEWLVLSRNRLT-LRNVQLPKIPTLYEVYLDFNRIEYIGEETFSQLD 298
Fly 299 NLHLLDLQHN-------------------------------------LITHIH----------GR 316
Fly 317 AFANLTN---------------------------------------------------------- 323
Fly 324 -----------MRDIRLVGNPIKELSGETFLHNTRLEALSLA---LMPIH----ISSSLMEPLNI 370
Fly 371 SF----------------LNLTG---IRYDHIDFEAINSMRNLT---------YIIYDRFFY--- 404
Fly 405 -------------CSMTPRVRMCKPSTDGVSSFQDLLSKPVLRYSAWVMATLTIAGNVLVLWGRF 456
Fly 457 IYRDENVAVT-MVIRNLALADMLMGFYLVTIGVQDYRYRNEYYKVVLDWITSWQCTLIGTLAVSS 520
Fly 521 SEVSMLILAFMSLERFLLI--------ADPFRGHRSIGNRVMWLALICIWITGVGLAVAPVLLWR 577
Fly 578 TSTLPYYGSYSGTCFPLHIHEAFPMGWLYSAFVFLGVNLLLLVMIAMLYTALLISIWRTRSATPL 642
Fly 643 TLLDCEFAVRFF-FIVLTDFLCWVPIIVMKIWVFF----NYNISDDIYAWLVVFVLPLNSAVNPL 702
Fly 703 LYTFTTPKYRNQIFLRGWKKITSRKRAEAGNGNVA--TTTTGTATGSSQHPDD 753 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lgr3 | NP_733115.1 | LDLa | 32..65 | CDD:238060 | |
| LRR_8 | 179..239 | CDD:290566 | 19/83 (23%) | ||
| leucine-rich repeat | 181..204 | CDD:275380 | 7/46 (15%) | ||
| LRR_RI | <196..354 | CDD:238064 | 56/274 (20%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 253..275 | CDD:275380 | 6/22 (27%) | ||
| LRR_8 | 274..334 | CDD:290566 | 27/175 (15%) | ||
| leucine-rich repeat | 276..299 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 300..323 | CDD:275380 | 12/69 (17%) | ||
| leucine-rich repeat | 324..347 | CDD:275380 | 8/22 (36%) | ||
| 7tm_1 | 447..704 | CDD:278431 | 63/270 (23%) | ||
| lgr4 | NP_001340791.1 | LRR 1 | 58..82 | 10/23 (43%) | |
| leucine-rich repeat | 64..85 | CDD:275380 | 9/20 (45%) | ||
| LRR_8 | 84..144 | CDD:316378 | 11/59 (19%) | ||
| LRR 2 | 84..106 | 1/21 (5%) | |||
| leucine-rich repeat | 86..109 | CDD:275380 | 1/22 (5%) | ||
| LRR 3 | 107..130 | 5/22 (23%) | |||
| leucine-rich repeat | 110..133 | CDD:275380 | 6/22 (27%) | ||
| LRR 4 | 131..154 | 7/22 (32%) | |||
| leucine-rich repeat | 134..157 | CDD:275380 | 8/22 (36%) | ||
| LRR | 137..>452 | CDD:227223 | 66/315 (21%) | ||
| LRR 5 | 156..178 | 7/21 (33%) | |||
| leucine-rich repeat | 158..181 | CDD:275380 | 7/22 (32%) | ||
| LRR 6 | 179..202 | 6/22 (27%) | |||
| leucine-rich repeat | 182..205 | CDD:275380 | 6/22 (27%) | ||
| LRR 7 | 204..226 | 8/21 (38%) | |||
| leucine-rich repeat | 206..229 | CDD:275380 | 9/22 (41%) | ||
| LRR 8 | 227..250 | 8/22 (36%) | |||
| leucine-rich repeat | 230..252 | CDD:275380 | 5/21 (24%) | ||
| LRR_8 | 251..308 | CDD:316378 | 7/56 (13%) | ||
| LRR 9 | 251..273 | 0/21 (0%) | |||
| leucine-rich repeat | 253..276 | CDD:275380 | 0/22 (0%) | ||
| LRR 10 | 275..297 | 5/21 (24%) | |||
| leucine-rich repeat | 277..298 | CDD:275380 | 4/20 (20%) | ||
| LRR 11 | 299..321 | 0/21 (0%) | |||
| LRR 12 | 322..344 | 0/21 (0%) | |||
| LRR 13 | 345..366 | 0/20 (0%) | |||
| leucine-rich repeat | 348..369 | CDD:275380 | 0/20 (0%) | ||
| LRR 14 | 367..390 | 8/22 (36%) | |||
| leucine-rich repeat | 370..393 | CDD:275380 | 8/22 (36%) | ||
| LRR 15 | 391..414 | 6/22 (27%) | |||
| leucine-rich repeat | 394..415 | CDD:275380 | 5/20 (25%) | ||
| LRR 16 | 416..438 | 3/21 (14%) | |||
| leucine-rich repeat | 418..438 | CDD:275380 | 2/19 (11%) | ||
| 7tmA_LGR4 | 527..811 | CDD:320483 | 69/302 (23%) | ||
| TM helix 1 | 528..554 | CDD:320483 | 7/25 (28%) | ||
| TM helix 2 | 562..587 | CDD:320483 | 6/24 (25%) | ||
| TM helix 3 | 607..637 | CDD:320483 | 14/29 (48%) | ||
| TM helix 4 | 649..679 | CDD:320483 | 7/38 (18%) | ||
| TM helix 5 | 698..727 | CDD:320483 | 8/29 (28%) | ||
| TM helix 6 | 736..766 | CDD:320483 | 5/33 (15%) | ||
| TM helix 7 | 779..804 | CDD:320483 | 6/24 (25%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||