Sequence 1: | NP_733115.1 | Gene: | Lgr3 / 43098 | FlyBaseID: | FBgn0039354 | Length: | 765 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001028581.1 | Gene: | Lgr6 / 329252 | MGIID: | 2441805 | Length: | 967 | Species: | Mus musculus |
Alignment Length: | 702 | Identity: | 160/702 - (22%) |
---|---|---|---|
Similarity: | 259/702 - (36%) | Gaps: | 179/702 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 148 LRRFPRLSSEVTNLIIIRNNLTLRDNIFANFTRLQKLTLKYNNISRVPLGSFSGLFHLERLELSH 212
Fly 213 -----------------------NNVSHLPHGVFLGLHSLQWLFLVNN--------------HLH 240
Fly 241 HLPVE---------QLRFFRRLEWLVLSR-----------------NRLTLRNVQLPKIPTLY-- 277
Fly 278 ----EVYLDFNRIEYIGEETFSQLDNLHLLDLQHNLITHIHGRAFANLTNMRDIRLVGN-----P 333
Fly 334 IKELSGETFLHNTRLEALSLALMPIHISSS-----LME--------------------------- 366
Fly 367 -----------PLNISFLNLTGIRYDHIDFEAINSMRNLTYIIYDRFFYCSMTPRVRMCKPSTDG 420
Fly 421 VSSFQDLLSKPVLRYSAWVMATLTIAGNVLVLWGRFIYRDENVA-VTMVIRNLALADMLMGFYLV 484
Fly 485 TIGVQDYRYRNEYYKVVLDWITSWQCTLIGTLAVSSSEVSMLILAFMSLERFLLIA-------DP 542
Fly 543 FRGHRSIGNRVMWLALICIWITGVGLAVAPVLLWRTSTLPYYGSYSGTCFPLHIHEAFPMGWLYS 607
Fly 608 AFVFLGVNLLLLVMIAMLYTALLI--------SIWRTRSATPLTLLDCEFAVRFFFIVLTDFLCW 664
Fly 665 VPIIVMKIWVFFN-YNISDDIYAWLVVFVLPLNSAVNPLLYTFTTPKYRNQI 715 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lgr3 | NP_733115.1 | LDLa | 32..65 | CDD:238060 | |
LRR_8 | 179..239 | CDD:290566 | 23/96 (24%) | ||
leucine-rich repeat | 181..204 | CDD:275380 | 10/22 (45%) | ||
LRR_RI | <196..354 | CDD:238064 | 60/231 (26%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 9/45 (20%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 7/45 (16%) | ||
leucine-rich repeat | 253..275 | CDD:275380 | 8/38 (21%) | ||
LRR_8 | 274..334 | CDD:290566 | 27/70 (39%) | ||
leucine-rich repeat | 276..299 | CDD:275380 | 13/28 (46%) | ||
leucine-rich repeat | 300..323 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 324..347 | CDD:275380 | 6/27 (22%) | ||
7tm_1 | 447..704 | CDD:278431 | 59/273 (22%) | ||
Lgr6 | NP_001028581.1 | LRRNT | 34..68 | CDD:214470 | |
LRR_4 | 70..107 | CDD:289563 | |||
leucine-rich repeat | 70..91 | CDD:275380 | |||
LRR 1 | 91..112 | ||||
LRR_8 | 92..150 | CDD:290566 | |||
LRR_4 | 92..131 | CDD:289563 | |||
leucine-rich repeat | 92..115 | CDD:275380 | |||
LRR 2 | 115..136 | ||||
leucine-rich repeat | 116..139 | CDD:275380 | |||
LRR_8 | 138..198 | CDD:290566 | 4/15 (27%) | ||
LRR 3 | 139..160 | ||||
leucine-rich repeat | 140..163 | CDD:275380 | |||
LRR_RI | 143..392 | CDD:238064 | 53/212 (25%) | ||
LRR 4 | 163..186 | 1/3 (33%) | |||
leucine-rich repeat | 164..187 | CDD:275380 | 1/4 (25%) | ||
LRR_8 | 186..246 | CDD:290566 | 23/62 (37%) | ||
LRR 5 | 187..208 | 6/23 (26%) | |||
leucine-rich repeat | 188..211 | CDD:275380 | 7/25 (28%) | ||
LRR 6 | 211..232 | 8/20 (40%) | |||
leucine-rich repeat | 212..235 | CDD:275380 | 10/22 (45%) | ||
LRR 7 | 235..256 | 4/20 (20%) | |||
leucine-rich repeat | 236..258 | CDD:275380 | 4/21 (19%) | ||
LRR_8 | 258..314 | CDD:290566 | 11/55 (20%) | ||
LRR 8 | 258..279 | 4/20 (20%) | |||
leucine-rich repeat | 259..282 | CDD:275380 | 5/22 (23%) | ||
LRR 9 | 282..302 | 3/19 (16%) | |||
leucine-rich repeat | 283..304 | CDD:275380 | 3/20 (15%) | ||
LRR 10 | 303..325 | 3/21 (14%) | |||
LRR_8 | 305..364 | CDD:290566 | 11/58 (19%) | ||
leucine-rich repeat | 307..348 | CDD:275380 | 9/40 (23%) | ||
LRR 11 | 329..350 | 5/20 (25%) | |||
LRR 12 | 353..374 | 5/20 (25%) | |||
leucine-rich repeat | 354..375 | CDD:275380 | 5/20 (25%) | ||
LRR_8 | 375..434 | CDD:290566 | 25/58 (43%) | ||
LRR 13 | 375..396 | 9/20 (45%) | |||
leucine-rich repeat | 376..399 | CDD:275380 | 12/22 (55%) | ||
LRR 14 | 399..420 | 10/20 (50%) | |||
leucine-rich repeat | 400..421 | CDD:275380 | 10/20 (50%) | ||
LRR 15 | 423..443 | 3/19 (16%) | |||
leucine-rich repeat | 424..444 | CDD:275380 | 4/19 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |