DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lgr3 and LOC1281307

DIOPT Version :10

Sequence 1:NP_733115.1 Gene:Lgr3 / 43098 FlyBaseID:FBgn0039354 Length:765 Species:Drosophila melanogaster
Sequence 2:XP_061501261.1 Gene:LOC1281307 / 1281307 VectorBaseID:AGAMI1_003744 Length:786 Species:Anopheles gambiae


Alignment Length:730 Identity:230/730 - (31%)
Similarity:350/730 - (47%) Gaps:114/730 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 CPAASFACDNGTLCVPRRQMCDSRNDCADSSDENPVECGLLYGSKEIADKIVRNAIEKKQQRLIS 96
            |....|.|:|...|:.:.:.|:...||.|.|||  :||.         |.:.||..:...::..:
Mosquito    72 CEDGFFRCNNTLQCIEQSKNCNGFPDCDDGSDE--LECD---------DDVGRNYYDHYFRKRPA 125

  Fly    97 AVS--------NASGADSTTSMVPRNQSLTLNMTCDIVTYPKACQCGQGTILYCGRYAKLRRFPR 153
            |::        |.:.|::|                        |:| :||.:.| .|..|...|.
Mosquito   126 AINDQLPYTPCNWNDANNT------------------------CKC-RGTDVLC-EYKGLTGLPS 164

  Fly   154 -LSSEVTNLIIIRNN--LTLRDNIFANFTRLQKLTLKYNNISRV-PL---GSFSGLFHLER---- 207
             |:||...|:.:..|  :.|..|:|..|.:|..|.|::.:|.|: |:   ||...| ||::    
Mosquito   165 VLTSENVTLLDLTGNVFIELNMNVFQRFPKLSTLVLRHCSIERIEPVKLAGSIDAL-HLDQNGLT 228

  Fly   208 ---------------LELSHNNVSHLPHGVFLGLHSLQWLFLVNNHLHHLPVEQLRFFRRLEWLV 257
                           |.||.|.::.|....|:.|..|:.|.|.:|.:..|..:.|.....|..|.
Mosquito   229 TLPDDFFPPGTVLRILVLSGNRINRLGRTNFVNLEFLEELDLKDNQIDALTEDVLAPLTNLRILY 293

  Fly   258 LSRNRL-TLRNVQLPKIPTLYEVYLDFNRIEYIGEETFSQLDNLHLLDLQHNLITHIHGRAFANL 321
            |:.||| .|....:|.:.||..:.|..|:||.| |.....|.:|..|.|..||:|.|....|.||
Mosquito   294 LNNNRLRKLVPGMIPALVTLQTLSLARNQIETI-EVCALDLPSLEHLYLSENLLTVIRNDTFGNL 357

  Fly   322 TNMRDIRLVGNPIKELSGETFLHNTRLEALSLALMPIHISSSLMEPLNISFLNLTGIRYDHIDFE 386
            ||:..:.|..|.|.....:.|....:|                      :.|||.|.::|.||..
Mosquito   358 TNLVGLFLNSNKITHFELDAFSGIAKL----------------------ATLNLQGNKFDRIDRR 400

  Fly   387 AINSMRNLTYIIYDRFFYCSMTPRVRMCKPSTDGVSSFQDLLSKPVLRYSAWVMATLTIAGNVLV 451
            .::::.||.:|.:..|.:|.....||:|:|..||:||.:.||..||||.|.|:||.:.|.||:||
Mosquito   401 VLDNLTNLHHIHFTEFHHCKAALHVRVCEPKGDGISSNRHLLDNPVLRASVWIMAAIGIVGNLLV 465

  Fly   452 LWGRFIYRDENVAV----TMVIRNLALADMLMGFYLVTIGVQDYRYRNEYYKVVLDWITSWQCTL 512
            |:||::....:...    ::.:|:||.:|:|||.||..|...|..:|.||.....:|..|..|..
Mosquito   466 LFGRYVVGSRSSQAHAEHSLYLRHLAASDLLMGVYLGIIATADIIFRGEYLTHDEEWRMSSICAF 530

  Fly   513 IGTLAVSSSEVSMLILAFMSLERFLLIADPFRGHRSIGNRVMWLALICIWITGVGLAVAPVLLWR 577
            .|.|:..|.:.|.|:|..::.:|.:.:..|.....|...||: |.|..:|......|:||:    
Mosquito   531 SGFLSTLSCQSSTLLLTLVTWDRLVSVTRPLYQRSSSKTRVI-LRLAVLWGVATAAAIAPL---- 590

  Fly   578 TSTLPYYGSY----SGTCFPLHIHEAFPMGWLYSAFVFLGVNLLLLVMIAMLYTALLISIWRTRS 638
             |...|:|.:    :|.|..:|||:.:.|||.|||.:|:.||.:.|:.|.:.|..:|.:|..:|:
Mosquito   591 -SATEYFGPHFYGSNGVCLSVHIHDPYAMGWEYSAGLFILVNTVSLLFIGISYLRMLQAIRVSRN 654

  Fly   639 ATPLTLLDCE---FAVRFFFIVLTDFLCWVPIIVMKIWVFFNYNISDDIYAWLVVFVLPLNSAVN 700
            .|..| |:|.   .|.||..||.||.:||:|:||:|:.....|.||..:||||.|.|||:|||:|
Mosquito   655 ETRNT-LNCREKVVARRFAIIVATDCVCWMPVIVVKLVALAGYEISPSLYAWLAVLVLPINSALN 718

  Fly   701 PLLYTFTTPKYRNQI 715
            |:|||.||.:::.|:
Mosquito   719 PVLYTLTTAQFKQQL 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lgr3NP_733115.1 LDLa 32..65 CDD:238060 11/32 (34%)
LRR 85..389 CDD:443914 87/338 (26%)
leucine-rich repeat 181..204 CDD:275380 9/26 (35%)
leucine-rich repeat 205..228 CDD:275380 8/41 (20%)
leucine-rich repeat 229..252 CDD:275380 6/22 (27%)
leucine-rich repeat 253..275 CDD:275380 8/22 (36%)
leucine-rich repeat 276..299 CDD:275380 8/22 (36%)
leucine-rich repeat 300..323 CDD:275380 10/22 (45%)
leucine-rich repeat 324..347 CDD:275380 4/22 (18%)
7tmA_Relaxin_R 431..715 CDD:320265 111/294 (38%)
TM helix 1 432..458 CDD:320265 15/25 (60%)
TM helix 2 465..490 CDD:320265 10/28 (36%)
TM helix 3 510..540 CDD:320265 8/29 (28%)
TM helix 4 552..574 CDD:320265 8/21 (38%)
TM helix 5 603..632 CDD:320265 12/28 (43%)
TM helix 6 644..674 CDD:320265 15/32 (47%)
TM helix 7 683..708 CDD:320265 16/24 (67%)
LOC1281307XP_061501261.1 None

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