DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lgr3 and LOC1276366

DIOPT Version :10

Sequence 1:NP_733115.1 Gene:Lgr3 / 43098 FlyBaseID:FBgn0039354 Length:765 Species:Drosophila melanogaster
Sequence 2:XP_315704.5 Gene:LOC1276366 / 1276366 VectorBaseID:AGAMI1_009304 Length:437 Species:Anopheles gambiae


Alignment Length:477 Identity:107/477 - (22%)
Similarity:181/477 - (37%) Gaps:116/477 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LCVPRRQMCDSRNDCADSSDENPVECGLLYGSKEIADKIVRNAIEKKQQRLISAVS--------- 99
            :.:||..:. .:..|....|.:   |.|: |:|..:|:|:...........:|.|.         
Mosquito    13 IALPRSPLA-KQLSCTMELDRS---CSLI-GAKVSSDEILTTTFASSNPSTLSTVQFARSSLTGI 72

  Fly   100 --------------NASGADSTTSMVPRN-------QSLTLNMTCDIVTYPKACQCGQGTILYCG 143
                          ||:|:| ...:..||       |||.|                        
Mosquito    73 PPAMFQTFPKLESLNATGSD-IKQIQSRNFADAKTLQSLYL------------------------ 112

  Fly   144 RYAKLRRFPRL----SSEVTNLIIIRNNL-TLRDNIFANFTRLQKLTLKYNNISRVPLGSFSGLF 203
            |..|:...|.:    :|.:..|.:..|.: |:....|.....|:.|.|..|:::.:..|.|..|.
Mosquito   113 RGNKIHDLPDVAFFGASRLQTLDLSDNAIATIESTAFKRLRELKTLLLGSNSLTELQPGVFDDLS 177

  Fly   204 HLERLELSHNNVSHLPHGVFLGLHSLQWLFLVNNHLHHLPVEQLRFFRR--LEWLVLSRNRLTLR 266
            .||||||..|.:..:...:|.|.|||..|.:.:|.|....|.|  |.||  .:.:..|.|:|:: 
Mosquito   178 DLERLELQQNGLGSIDDRLFQGCHSLTALNVSHNALKTFNVAQ--FERRWSFDLIDASYNKLSV- 239

  Fly   267 NVQLPKIPTLYEVYLDFNRIEYIGEETFSQLDNLHLLDLQHNLITHI-HGRAFANLTNMRDIRLV 330
             |::|  |.|.::....|.|..: |.|.:....|.||.|.||.:|.: ....|..|..: |:.. 
Mosquito   240 -VRIP--PNLRQLVAIGNGIRTV-ESTATNGSELILLKLPHNKLTSVDEVPVFEKLITL-DLSF- 298

  Fly   331 GNPIKELSGETFLHNTRLEALSLALMPIH-ISSSLMEPL-NISFLNLTGIRYDHIDFEAINSMRN 393
             |.|:|....:.....:|..|.|....:. :|:||..|: ::.:::|...::.|:|...:.::..
Mosquito   299 -NRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITHLKYVHLADNQFTHLDLNVLRTVPR 362

  Fly   394 LTYIIYDRFFYCSMTPRVRMCKPSTDGVSSFQDLLSKPVLRYSAWVMATLTIAGNVLVLWGRFIY 458
            :..:...|    :...|:.:    ||...||.             ||..:.:.||      ||..
Mosquito   363 ILKLDLRR----NQLERLAV----TDLAGSFP-------------VMVRIMLEGN------RFRC 400

  Fly   459 RD---------ENVAVTMVIRN 471
            .|         |::....:.||
Mosquito   401 ADSRPLLKELKESITAYAMTRN 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lgr3NP_733115.1 LDLa 32..65 CDD:238060 4/20 (20%)
LRR 85..389 CDD:443914 81/343 (24%)
leucine-rich repeat 181..204 CDD:275380 7/22 (32%)
leucine-rich repeat 205..228 CDD:275380 9/22 (41%)
leucine-rich repeat 229..252 CDD:275380 7/22 (32%)
leucine-rich repeat 253..275 CDD:275380 5/21 (24%)
leucine-rich repeat 276..299 CDD:275380 5/22 (23%)
leucine-rich repeat 300..323 CDD:275380 9/23 (39%)
leucine-rich repeat 324..347 CDD:275380 4/22 (18%)
7tmA_Relaxin_R 431..715 CDD:320265 10/50 (20%)
TM helix 1 432..458 CDD:320265 6/25 (24%)
TM helix 2 465..490 CDD:320265 2/7 (29%)
TM helix 3 510..540 CDD:320265
TM helix 4 552..574 CDD:320265
TM helix 5 603..632 CDD:320265
TM helix 6 644..674 CDD:320265
TM helix 7 683..708 CDD:320265
LOC1276366XP_315704.5 None
Blue background indicates that the domain is not in the aligned region.

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