Sequence 1: | NP_733115.1 | Gene: | Lgr3 / 43098 | FlyBaseID: | FBgn0039354 | Length: | 765 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001120199.1 | Gene: | lrrc57 / 100145243 | XenbaseID: | XB-GENE-5779276 | Length: | 238 | Species: | Xenopus tropicalis |
Alignment Length: | 261 | Identity: | 70/261 - (26%) |
---|---|---|---|
Similarity: | 105/261 - (40%) | Gaps: | 66/261 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 148 LRRFP----RLSSEVTNLIIIRNNLTLRDNIFANFTRLQKLTLKYNNISRVPLGSFSGLFHLERL 208
Fly 209 ELSHNNVSHLPHGVFLGLHSLQWLFLVNNHLHHLPVEQLRFFRRLEWLVLSRNRLTLRNVQLPKI 273
Fly 274 PTLYEVYLDFNRIEYIGEETFSQLDNLHLLDLQHNLITHI--HGRAFANLTNMRDIRLVGNPIKE 336
Fly 337 LSGETFLHNTRLEALSLALMPIHISSSLMEPLNISFLNLTGIRYDHIDFEAINSMRNLTYIIYDR 401
Fly 402 F 402 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lgr3 | NP_733115.1 | LDLa | 32..65 | CDD:238060 | |
LRR_8 | 179..239 | CDD:290566 | 24/59 (41%) | ||
leucine-rich repeat | 181..204 | CDD:275380 | 10/22 (45%) | ||
LRR_RI | <196..354 | CDD:238064 | 41/159 (26%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 253..275 | CDD:275380 | 3/21 (14%) | ||
LRR_8 | 274..334 | CDD:290566 | 19/61 (31%) | ||
leucine-rich repeat | 276..299 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 300..323 | CDD:275380 | 6/24 (25%) | ||
leucine-rich repeat | 324..347 | CDD:275380 | 3/22 (14%) | ||
7tm_1 | 447..704 | CDD:278431 | |||
lrrc57 | NP_001120199.1 | LRR | <20..>168 | CDD:227223 | 52/169 (31%) |
leucine-rich repeat | 40..62 | CDD:275380 | 2/21 (10%) | ||
leucine-rich repeat | 63..85 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 86..108 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 109..131 | CDD:275380 | 10/45 (22%) | ||
leucine-rich repeat | 132..154 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 155..176 | CDD:275380 | 6/24 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4149 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |