DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RASSF8 and rassf8

DIOPT Version :9

Sequence 1:NP_651411.1 Gene:RASSF8 / 43096 FlyBaseID:FBgn0261986 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_031753956.1 Gene:rassf8 / 100495279 XenbaseID:XB-GENE-994903 Length:418 Species:Xenopus tropicalis


Alignment Length:617 Identity:120/617 - (19%)
Similarity:215/617 - (34%) Gaps:242/617 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VTVNTTCQDVVFALAHATGKVGRFTLIERWRNNERHLAPNENPMKLLLKWGEYANDVQFILQRSE 81
            :|::.:.......|....|:.||:||||:||..||||||:|||:..|.|||:||:|||.||:|  
 Frog    18 ITLHFSIAPSCVLLLSLPGRTGRYTLIEKWRETERHLAPHENPVISLNKWGQYASDVQLILKR-- 80

  Fly    82 NKTQQQQQQQQQQQQNNNNNNNYAVMTTTKKPLGPNNNNN---NKPAPTLLKQKSNVELSYRTKE 143
                                        |...||....::   :.|..||.:|            
 Frog    81 ----------------------------TGPSLGERPTSDSIAHVPERTLYRQ------------ 105

  Fly   144 LKKSFGGHDAKQFDNIGIVKGIPQQQQLQSQQTAMGAPASPPQEQLTPQDNNNVAPLVPKHEKSL 208
                                                  :.||..:|.||::.::....|| .|||
 Frog   106 --------------------------------------SLPPLAKLRPQNDRSIRRREPK-RKSL 131

  Fly   209 SNPLDMTSTGSNPPAPTNGYNDFYNNNSSSNQHIYSQLSKSSNELRRSSPNEMYYNNNNNIVNNN 273
                  |.||.     ..|..|.:.....|             |.|:            .::|| 
 Frog   132 ------TFTGG-----AKGLIDIFGKGKES-------------EFRQ------------RVLNN- 159

  Fly   274 NNSPELYKQTPTISANGALVPPPYRDPPPPRNSPMCQGQRLASSNADTMSNASSSTNPFLSDYDQ 338
                                               |:                            
 Frog   160 -----------------------------------CK---------------------------- 161

  Fly   339 HSSHNTNSINNNSQAMEEGEPMFQTTQYNDLLQLIKFQREKITAQQMELQKFDTEIVYLESKERD 403
                                     |...:|.:||..|.||:.:.:.:|...:.|..|.:.|   
 Frog   162 -------------------------TTAEELKKLIHLQNEKLLSLEKQLDSNEAETRYWQQK--- 198

  Fly   404 HAHELDAISREISKADQIFRQGSEQLQTLQYVEEENELVKQQEKTLKSEIALLRSKLANCETELL 468
            |...||   .|:.:.:|..::...:::..::.|.|.::..:.||.||.::..::.:::.||.:|.
 Frog   199 HKSNLD---EEMGRLEQKIKKNEVEIEEEEFWENELQIEMENEKQLKEQLEEMKQRISQCERQLK 260

  Fly   469 QCKNKMRLLMDDIELE----QQHQQQTNRQTVERDFLMEMERIQSEIDQALHNTDTSNKTADSLK 529
            ..:.::|.:...||.|    :.|:.|.....:..    :||:::.:::...|.:......:.:::
 Frog   261 AYQAQIRSIEGGIEAEKLQLEDHEAQVKGGIIRG----KMEKVKGDLEVQGHESVRIENGSKAVE 321

  Fly   530 KELLMIEHAIADKKRQVEQLVNEMKEVNLQ--------SLTVTTTEEIKHLLEGPNKQ------- 579
            :.|......:.|:::::|||..|:::||||        .:||...|........|.|:       
 Frog   322 RSLGQAARRLLDREQELEQLTKELRQVNLQQFIQQTGTKVTVLPAEPSDAEFPQPEKEPAFQSGS 386

  Fly   580 ----GSSRRIIGSPRQLETAVPTSKNPHGVWV 607
                ||||::..:.|.|:.|:.:..||.|::|
 Frog   387 LKRPGSSRQLPSNLRILQNALTSGFNPEGIYV 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RASSF8NP_651411.1 UBQ 1..81 CDD:294102 32/63 (51%)
rassf8XP_031753956.1 Ubiquitin_like_fold <36..84 CDD:421700 31/77 (40%)
SMC_prok_B <148..>364 CDD:274008 51/339 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1442074at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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