DRSC/TRiP Functional Genomics Resources

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Protein Alignment RASSF8 and LOC100003291

DIOPT Version :9

Sequence 1:NP_651411.1 Gene:RASSF8 / 43096 FlyBaseID:FBgn0261986 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_001342892.4 Gene:LOC100003291 / 100003291 -ID:- Length:444 Species:Danio rerio


Alignment Length:640 Identity:149/640 - (23%)
Similarity:248/640 - (38%) Gaps:229/640 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MELKVWVEGIQRIVCGVTVNTTCQDVVFALAHATGKVGRFTLIERWRNNERHLAPNENPMKLLLK 65
            |||||||:|:||:|||||..||||:||.|||.|.|:.||:||||:||:.||||.|:|:|:..|..
Zfish     1 MELKVWVDGVQRVVCGVTEATTCQEVVIALAQAIGRTGRYTLIEKWRDTERHLVPHESPVASLNT 65

  Fly    66 WGEYANDVQFILQRSENKTQQQQQQQQQQQQNNNNNNNYAVMTTTKKPLGPNNNNNNKPAPTLLK 130
            ||:||.||||||.|:                 ..:.|.|.. ...:.||||....:.:..|.:.|
Zfish    66 WGQYAGDVQFILHRT-----------------GPSLNEYPT-AECQTPLGPERGLHRQSLPLMAK 112

  Fly   131 QKSNVELSYRTKELKKSFGGHDAKQFDNIGIVKGIPQQQQLQSQQTAMGAPASPPQEQLTPQDNN 195
            .::..:.|.|.:|                      |:::.|    |..|.|              
Zfish   113 LRAPGDRSLRRRE----------------------PRRKSL----TFTGVP-------------- 137

  Fly   196 NVAPLVPKHEKSLSNPLDMTSTGSNPPAPTNGYNDFYNNNSSSNQHIYSQLSKSSNELRRSSPNE 260
                      :||.   |:.|.|                          :||.||...|..    
Zfish   138 ----------RSLR---DILSGG--------------------------RLSDSSARQREV---- 159

  Fly   261 MYYNNNNNIVNNNNNSPELYKQTPTISANGALVPPPYRDPPPPRNSPMCQGQRLASSNADTMSNA 325
                    :|.:.:|||.:                          ||...|.|:           
Zfish   160 --------LVRSASNSPAV--------------------------SPRLSGNRI----------- 179

  Fly   326 SSSTNPFLSDYDQHSSHNTNSINNNSQAMEEGEPMFQTTQYNDLLQLIKFQREKITAQQMELQKF 390
                                                     .||.||::.|||.::.....::.:
Zfish   180 -----------------------------------------EDLTQLVRLQRETLSVLDGRMEAY 203

  Fly   391 DTEI-------VYLESKERDHAHELDAISREISKADQIFRQGSEQLQTLQYVEEENELVKQQEKT 448
            :.::       |.||..|.     ...::.|:|:.::..|:...:::..::...|.::..:.|:.
Zfish   204 EADLRMLTEKRVGLEDNEM-----FVKLTEEVSRLEKQVRRNKVEIEEEEFWATELQIELESERQ 263

  Fly   449 LKSEIALLRSKLANCETELLQCKNKMRLLMD---DIELEQQHQQ-QTNRQTVERDFLMEMERIQS 509
            |:..|..|..:|..||.:|.|   :||.|..   .||.::||:: :..:|..|.:....::|.::
Zfish   264 LQERIQELSGRLRGCEVDLEQ---RMRTLQGVEAGIETQRQHKEIRETQQASEGEVKARLQRAKA 325

  Fly   510 EID-QALHNTDTSNKTADSLKKELLMIEHAIADKKRQVEQLVNEMKEVNLQSLTVTTTEEIKHLL 573
            |:. ||.|:....| ::.::.:.|......:.:.:.::|||..|:::||||.....|..::..|.
Zfish   326 ELKVQAQHSAQIEN-SSRAVDRSLTESCRRLQESQYELEQLTKELRQVNLQQFIQQTGTKVTVLP 389

  Fly   574 EGPNKQ---------------GSSRR------IIGSPRQLETAVPTSKNPHGVWV 607
            ..|..:               ||.:|      ::||.|.|.:.:....||.|::|
Zfish   390 VEPGDEESSSTTGDKDFAALTGSLKRPSLSHPVVGSIRGLHSPISAGLNPEGIYV 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RASSF8NP_651411.1 UBQ 1..81 CDD:294102 53/79 (67%)
LOC100003291XP_001342892.4 RA 1..81 CDD:214612 53/96 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580555
Domainoid 1 1.000 123 1.000 Domainoid score I5533
eggNOG 1 0.900 - - E1_KOG1574
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H138283
Inparanoid 1 1.050 206 1.000 Inparanoid score I3689
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1442074at2759
OrthoFinder 1 1.000 - - FOG0002327
OrthoInspector 1 1.000 - - otm24397
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15286
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4258
SonicParanoid 1 1.000 - - X5141
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.890

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