DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tnks and tnsl-1

DIOPT Version :9

Sequence 1:NP_001262963.1 Gene:Tnks / 43095 FlyBaseID:FBgn0027508 Length:1520 Species:Drosophila melanogaster
Sequence 2:NP_001361839.1 Gene:tnsl-1 / 172642 WormBaseID:WBGene00010498 Length:1198 Species:Caenorhabditis elegans


Alignment Length:768 Identity:160/768 - (20%)
Similarity:255/768 - (33%) Gaps:251/768 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 CHSKSAIDAAPTRELRERIAFEYKGHCLLD-----ACRKCDVSRAKKLV--CAEIV-----NFVH 359
            |.|:|          :|::::..:..||..     ...:.|:.||.:|.  ..|:|     :|..
 Worm    98 CGSRS----------QEQLSYHVEAWCLQQLFLNGEAERTDIERAIELTKKARELVDLYKSSFKE 152

  Fly   360 PYTGDTP---------LHLAVVSPDGKRKQLMELLTRKGSLL--NEKNKAF--------LTPLHL 405
            ...|..|         |...:.:..|...:.|:||.:...||  |:|:..|        :.|::.
 Worm   153 SEPGGAPKVRKAQLFTLEAQLQNQIGNNARAMQLLDKTEGLLRVNDKSMRFEMLRTKCSIAPVNQ 217

  Fly   406 ---AAELLHYDAME--------VLLKQGAKVNALD----SLGQT--------PLHRCARDEQAVR 447
               .|||:..||.|        .|..|....|.||    ||.:.        |.|..  ::...|
 Worm   218 RVDIAELMDDDASEDKKAQTLCELSHQYLLANRLDKAYKSLAEAYFFHEARFPAHEL--EDTVKR 280

  Fly   448 LLLSYAADTNIVSLEGLTAAQLASDSVLKLLKNP---PD-SETHLLEAAKAGDL----------- 497
            :.:.|    .:|...             |:.|||   |. |:..|.||  .|||           
 Worm   281 ICIIY----RLVKYN-------------KIRKNPQMEPKLSKCQLYEA--IGDLYDQYFQTLMAK 326

  Fly   498 --DTVRRIVLNN-----------------------PISVNCRDLDGRHSTPLHFAAGFNRVPVVQ 537
              ...|:.|.:|                       .:::...||| .||..|.....     :::
 Worm   327 EKKEYRQFVRDNILMSYQKMLEFKRNDEDALRAYQGMALVYSDLD-EHSKSLEMFKN-----LLE 385

  Fly   538 FLLEHGA----------EVYAA----DKGGLVPLHNACSYGHYEVTELLVKHGANVNVSDLWKFT 588
            .|::.||          .::..    |...|.|:.|..   :.::..|..|.....|.::.|...
 Worm   386 LLMKTGATEEKILDTRVSIFGCMCKLDFTDLEPMFNEL---NGKILRLDTKRELYENWANYWSDK 447

  Fly   589 PLHEAAAKGKYDICKLLLKHGADPMKKNRDGATPADLVKESDHDVAELLRGPSALLDAAKKGNLA 653
            ...|.|.|.|.:...:     .:.:.||.|..|.....|.||.||.|..:..:.||..       
 Worm   448 RNEENAIKWKQETDNI-----PEVVIKNEDDETDVLYWKLSDEDVLERCKEENELLKL------- 500

  Fly   654 RVQRLVTPESINCRDAQGRNSTPLHLAAGYNNFECA-EYLLENGADVNAQDKGGLIPLHNASSYG 717
               .|:|...:|..:.:|  .|.||.||..:..|.. |.|...|..|||:|.||..||..|.::.
 Worm   501 ---DLLTEHQLNKTNDKG--ETVLHQAAMKSENEAVIERLCRRGCKVNAKDNGGWTPLSEAVAHN 560

  Fly   718 HLDIAALLIKHKTVVNATDKWGF-----------------TPLHEAAQKGRTQLCSLLLAHGADA 765
            ......:|:::...|||.....|                 |||.||...|...:..||:.:.|..
 Worm   561 QYGNVLVLLRYGAEVNARSAESFMSEESQNSSTELNHSRLTPLMEACTNGYVDIAQLLIDNRASV 625

  Fly   766 YMKNQEGQTP-----------------------IELATA-------------------------- 781
            .:::..|.|.                       :::.||                          
 Worm   626 DLRDSAGWTAYQHLKRFIDENEYTERHLKFAENLKILTANYKAPVNIPPPHPINRIPRIHQEEED 690

  Fly   782 ---DDVKCLLQDAMATSLSQQALSASTQSLTSSS---------PAPDATAAAAPGTSSSSSSAIL 834
               |||:..:..|||.|..::..:.|..|..:|.         ..|::|   .|.|:.|:...::
 Worm   691 IPPDDVEDGMIYAMAASRKRRNSNNSDNSSNTSKRKQRSEENIKPPNST---PPTTAHSNRKRLV 752

  Fly   835 SP---TTETVLLPTGASMILSVPVPLPLSSSTRISPAQGAEANGAEGSSSDDL 884
            .|   |::.|.....:|.:.|.| ...:|....|||.....:..:.....|||
 Worm   753 QPSLITSKRVQRQNSSSSLTSNP-RNSISPRRSISPTTTVRSAPSVFGGDDDL 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TnksNP_001262963.1 ANK 49..163 CDD:238125
ANK repeat 59..87 CDD:293786
Ank_2 61..153 CDD:289560
ANK repeat 89..120 CDD:293786
ANK repeat 122..153 CDD:293786
ANK 202..316 CDD:238125 3/8 (38%)
ANK repeat 212..240 CDD:293786
Ank_2 214..306 CDD:289560
ANK repeat 242..273 CDD:293786
ANK repeat 275..306 CDD:293786
ANK 361..478 CDD:238125 32/158 (20%)
ANK repeat 363..396 CDD:293786 10/43 (23%)
Ank_2 367..459 CDD:289560 28/124 (23%)
ANK 393..573 CDD:238125 51/264 (19%)
ANK repeat 398..429 CDD:293786 11/49 (22%)
ANK repeat 431..459 CDD:293786 5/35 (14%)
ANK repeat 483..515 CDD:293786 10/68 (15%)
Ank_4 486..540 CDD:290365 15/89 (17%)
ANK 512..637 CDD:238125 31/138 (22%)
ANK repeat 522..550 CDD:293786 4/41 (10%)
Ank_2 524..616 CDD:289560 16/105 (15%)
ANK repeat 552..583 CDD:293786 6/30 (20%)
ANK repeat 585..610 CDD:293786 5/24 (21%)
ANK repeat 638..668 CDD:293786 5/29 (17%)
Ank_4 641..693 CDD:290365 13/52 (25%)
ANK 665..779 CDD:238125 36/154 (23%)
ANK repeat 672..703 CDD:293786 12/31 (39%)
Ank_2 677..769 CDD:289560 31/109 (28%)
ANK repeat 705..736 CDD:293786 9/30 (30%)
ANK repeat 738..769 CDD:293786 10/47 (21%)
SAM_tankyrase1,2 887..952 CDD:188923
SAM 890..952 CDD:197735
tankyrase_like 948..1170 CDD:238718
PARP 961..1165 CDD:279038
tnsl-1NP_001361839.1 ANK repeat 515..546 CDD:293786 13/32 (41%)
Ank_2 519..629 CDD:372319 31/109 (28%)
ANK repeat 548..596 CDD:293786 10/47 (21%)
ANK repeat 598..629 CDD:293786 9/30 (30%)
leucine-rich repeat 970..989 CDD:275380
leucine-rich repeat 1037..1062 CDD:275380
leucine-rich repeat 1063..1093 CDD:275380
leucine-rich repeat 1094..1121 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156306
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.