DRSC/TRiP Functional Genomics Resources

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Protein Alignment jigr1 and NHP10

DIOPT Version :9

Sequence 1:NP_001097920.1 Gene:jigr1 / 43093 FlyBaseID:FBgn0039350 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_010282.3 Gene:NHP10 / 851562 SGDID:S000002160 Length:203 Species:Saccharomyces cerevisiae


Alignment Length:219 Identity:44/219 - (20%)
Similarity:74/219 - (33%) Gaps:89/219 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 EKRRVEN--------GLSTQSSQWPLFESLQFLGDHIRPRRSFKNMSVKEEDEETYEVDDCRSDS 145
            :|||:|.        ||:.|                 |.|.|.|.:.::      |.|       
Yeast     6 KKRRLEELKDQNVVLGLAIQ-----------------RSRLSVKRLKLE------YGV------- 40

  Fly   146 NGHMNSIKDELEDDSEIFDCEQALPVTT-----VLGIPLNNSD---------EANKSQRSTNG-- 194
              .:..::..:|.|.|: :||..||...     :|..|...|.         :.|..:|.||.  
Yeast    41 --LLERLESRIELDPEL-NCEDPLPTLASFKQELLTKPFRKSKTKRHKVKERDPNMPKRPTNAYL 102

  Fly   195 ---EM------PNG---------KGYNHFAES----YHRRH-QNQPEYIISSPIVNPMRSN---- 232
               ||      .||         :|:.:..|.    |::.: :::..|.:...|.|...||    
Yeast   103 LYCEMNKERIRQNGSLDVTRDLAEGWKNLNEQDRKPYYKLYSEDRERYQMEMEIYNKKISNIDAD 167

  Fly   233 ---KRGSQHL--DDHPSKRRVDDS 251
               :...|.:  ::..|..:|.||
Yeast   168 DDKEENEQKIKNNEEGSSTKVADS 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jigr1NP_001097920.1 MADF 33..118 CDD:214738 7/36 (19%)
NHP10NP_010282.3 NHP6B 24..203 CDD:227935 38/201 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5648
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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