powered by:
Protein Alignment jigr1 and Hmgb4
DIOPT Version :9
Sequence 1: | NP_001097920.1 |
Gene: | jigr1 / 43093 |
FlyBaseID: | FBgn0039350 |
Length: | 336 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102933.1 |
Gene: | Hmgb4 / 685271 |
RGDID: | 1596426 |
Length: | 181 |
Species: | Rattus norvegicus |
Alignment Length: | 190 |
Identity: | 38/190 - (20%) |
Similarity: | 59/190 - (31%) |
Gaps: | 60/190 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MENLSHLYPPQLPKGRGRPRATYAQTGEFDLGLIREYRSHPVLYDRSNKRFKDKLYVAHIWEQIA 65
|.|..:.:..|.|. ||....||......::|| .:|..|.| :|.||
Rat 20 MINFRNKFKEQQPN-------TYLTFNEFSRRCSEKWRS-------ISKNEKAK------FEAIA 64
Fly 66 HKLGYDATSIRERMTTLRNRYNIEKRRVENGLSTQSSQWPLFESLQFLGDHI-RPRRSFKNMSV- 128
|| |....:|.|... :.|||........:.:.|....|.|..||. :.::...|.:|
Rat 65 -KL--DKARYQEEMMNY-----VGKRRKRRKRDPLAPRKPPSSFLLFSLDHFAKLKQENPNWTVV 121
Fly 129 -------------KEEDEETYE-----------------VDDCRSDSNGHMNSIKDELED 158
.:.|:..|| :..|::.......|.|..|::
Rat 122 QVAKAAGKMWSMITDVDKRPYEQKAAIMRAKYFQEREAYLSQCQNSKINLQGSSKSSLKE 181
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
Return to query results.
Submit another query.