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Protein Alignment jigr1 and tox
DIOPT Version :9
Sequence 1: | NP_001097920.1 |
Gene: | jigr1 / 43093 |
FlyBaseID: | FBgn0039350 |
Length: | 336 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001243623.1 |
Gene: | tox / 569666 |
ZFINID: | ZDB-GENE-070912-181 |
Length: | 540 |
Species: | Danio rerio |
Alignment Length: | 188 |
Identity: | 40/188 - (21%) |
Similarity: | 65/188 - (34%) |
Gaps: | 68/188 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 197 PNGKGYNHFAES-YHRRHQNQ------PE-----------YIISSPIVNPMRSNKRG-------- 235
|:..|.:|:::| |..::.:: || .:.:|| .....|||:.
Zfish 17 PSRLGQSHYSDSPYCNKYDSENMFMSMPEPGQDFVPGNQFRVPASP-SQTQHSNKQAGGHWKRET 80
Fly 236 SQHLDDH-------PSKRRVDDSLSISGYY-PTQP---LAPLPPAYAKFRGFGEFMCHSLC---- 285
..|.|.| |.....|:..:|.... ||.| ||.||.:.: |.: |.||
Zfish 81 QTHTDGHRLTWQSYPVPSLGDEDFNIPPITPPTLPEHMLAHLPESES-----GTY--HPLCPPVS 138
Fly 286 ------------DMPAATALRLVQK----FTREL-VQSSLRNEDS--GSKEKTDEVDP 324
|:|...:..::.: .|..| |...:.|.|| |...:.|.:.|
Zfish 139 QNGLHPFHLQGMDLPGMLSPNMLSQDGSLLTNSLSVMQQMVNSDSRYGGHPQVDTLRP 196
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
jigr1 | NP_001097920.1 |
MADF |
33..118 |
CDD:214738 |
|
tox | NP_001243623.1 |
HMG-box |
289..>338 |
CDD:238037 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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