Protein Alignment jigr1 and hmgb3a

DIOPT Version :9

• Sequence 1: NP_001097920.1
• Gene: jigr1 / 43093
• FlyBaseID: FBgn0039350
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001116308.1
• Gene: hmgb3a / 561025
• ZFINID: ZDB-GENE-050428-1
• Length: 213
• Species: Danio rerio
• Alignment Length: 224
• Identity: 41/224 - (18%)
• Similarity: 86/224 - (38%)
• Gaps: 59/224 - (26%)

  Fly    10 PQLPKGRGRPRATYAQTGEFDLGLIREYRSH----PVLYDRSNKRFKDKLYVAHIWEQIAHKLGY 70
            |:.|||:....|.:.||..      .|::..    ||.:...:||...:      |:.:..|
Zfish     6 PRKPKGKMSAYAYFVQTCR------EEHKKKSPEIPVSFSEFSKRCSGR------WKAMTDK--- 55

  Fly    71 DATSIRERMTTLRNRYNIE----------KRRVENGLSTQSSQWPLFESLQFLGDHIRP--RRSF 123
            :.:...:.....:.||:.|          |::..|......|.:.||.|     :| ||  :..:
Zfish    56 EKSRFEDMAKQDKVRYDQEMMHYMPGKRGKKKDPNAPKRPPSGFFLFCS-----EH-RPQIKAQY 114

  Fly   124 KNMSVKEEDEETYEVDDCRSDSNGH-----MNSIKDELEDDSEIFDCE-QALPVTTVLGIPLNN- 181
            .::.:.:..::..|:.:..:|:|..     .|.:||:.:.|...:..: :|..|:..:|:|:.|
Zfish   115 PSLGIGDVAKKLGEMWNGLTDANKQPFLMKANKLKDKYQKDVADYKTKSKAGGVSMGMGMPMANC 179

  Fly   182 ---------------SDEANKSQRSTNGE 195
                           .||.::.:...:.|
Zfish   180 MPPKPMMKSNMDDEEDDEEDEEEEEDDDE 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
jigr1	NP_001097920.1	MADF	33..118	CDD:214738	17/98 (17%)
hmgb3a	NP_001116308.1	HMG_box_2	7..78	CDD:286146	16/85 (19%)
		HMG_box	92..159	CDD:278906	14/72 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900