DRSC/TRiP Functional Genomics Resources

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Protein Alignment jigr1 and CG11504

DIOPT Version :10

Sequence 1:NP_651409.1 Gene:jigr1 / 43093 FlyBaseID:FBgn0039350 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_651758.1 Gene:CG11504 / 43557 FlyBaseID:FBgn0039733 Length:410 Species:Drosophila melanogaster


Alignment Length:385 Identity:69/385 - (17%)
Similarity:130/385 - (33%) Gaps:135/385 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TGEFDLGLIREYRSHPVLYDRSNKRFKDKLYVAHIWEQIAHKLG--YDATSIRERMTTLRNRYNI 88
            |.|..|.||.||||...|:|.:...::.|.....:..:::..||  .....:.::..|||.:|:.
  Fly     4 TREKTLQLISEYRSRRGLWDMTCDEYRKKDVKQRLLNEVSQVLGGNIPINELEKKFHTLRTQYHR 68

  Fly    89 EKRRVENGLSTQSSQWPLFESLQFLGDHIRPRRSFKNMSVK-EEDEETYEVDDCRSDSN------ 146
            |..|::. ....:|:|..|::|.||......|.:...:... :.||..:.:.:..:|.|      
  Fly    69 EISRMKR-KEPYNSKWFGFKNLVFLSSPYACRSTKGRLKADLQGDERKFVLGEVTADHNSDSSTP 132

  Fly   147 ------------------GHMNSIKDELE-------------DDSEIFDCE----QALPVTTVLG 176
                              .|.:|...|||             |:||:.:.|    ||..: :|..
  Fly   133 ANHNSNTNANMNEEYLRKNHASSRAQELEKLIEETTKDVDDIDESELEEGEVKPKQAKEM-SVRF 196

  Fly   177 IPLN----------------------NSDEANKSQRSTNGEMPNGKGYNHFAESYHRRHQNQPEY 219
            :.||                      |:.||...|.:.:||:       |:..:..:...:...:
  Fly   197 VSLNEQEETEPLENHHQTLMDLHHQGNAVEAVSFQANESGEL-------HYQTTPTQSTGSSSVH 254

  Fly   220 IISSPIVNPMRSNKRGSQ---HLDDH-----PSKRRVDDSLSISGYYPTQPLAP----------- 265
            ::.:.|:...|.:....|   :.::|     |..:|:....|.:.:..|..|:|           
  Fly   255 VMPTRIIKIQRRDTSSGQEDSYFEEHTQLHPPPVKRMYYEASPASHNTTSILSPALESSANGTAS 319

  Fly   266 -----------------------------------------LPPAYAKFRGFGEFMCHSL 284
                                                     ||||..:|..:||::.:.:
  Fly   320 SVLTTSPGITMSNLRLPKVNTPPKPAQAQAIPSPPPPTIVSLPPARDEFATYGEYVANEM 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jigr1NP_651409.1 MADF 33..118 CDD:214738 23/86 (27%)
CG11504NP_651758.1 MADF_DNA_bdg 11..92 CDD:463144 21/81 (26%)

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