DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment jigr1 and CG12104

DIOPT Version :9

Sequence 1:	NP_001097920.1	Gene:	jigr1 / 43093	FlyBaseID:	FBgn0039350	Length:	336	Species:	Drosophila melanogaster
Sequence 2:	NP_001261267.1	Gene:	CG12104 / 38187	FlyBaseID:	FBgn0035238	Length:	250	Species:	Drosophila melanogaster

Alignment Length:	253	Identity:	40/253 - (15%)
Similarity:	73/253 - (28%)	Gaps:	124/253 - (49%)

- Green bases have known domain annotations that are detailed below.

  Fly   133 EETYEVDDCRSDSNGHMNSIKDELEDDSEIFDCEQALPVTTVLGIPLNNSDEANKSQRSTNGEMP 197
            :|.:|:.|..::|.....:.:..|..|..:                ||:.||.|....::.|
  Fly    11 DEVFELTDTPAESQSPSQASRRMLSLDQSM----------------LNDDDEENCDTYASGG--- 56

  Fly   198 NGKGYNHFAESYHRRHQNQPEYIISSPIVNPMRSNKRGSQHLDDHPSKRRVDDSLSISGYYPTQP 262
               |.|...         |||          .:.|:..:|                    .|.:|
  Fly    57 ---GQNLLV---------QPE----------QQQNQAMAQ--------------------APPKP 79

  Fly   263 LAPLPPAYAKFRGFGEFMC-----HSLCDMPAATAL----------------------------R 294
            |||    :|.|  |.:.:.     :..|.:.....:                            |
  Fly    80 LAP----FALF--FRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHEQEKREYVR 138

  Fly   295 LVQKFTRELVQSSLRNEDSGSKE------------------KTDEVDPVDQSSESQEE 334
            |::.:..:|      :|..|:.|                  |.:.|:.:.||.::|:|
  Fly   139 LMRGYRHQL------SESEGTSEAEAPPAVATNQPPPLVTTKLESVEDLQQSVDAQQE 190

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
jigr1	NP_001097920.1	MADF	33..118	CDD:214738
CG12104	NP_001261267.1	HMG-box	76..140	CDD:238037	10/69 (14%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900