DRSC/TRiP Functional Genomics Resources

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Protein Alignment jigr1 and hng3

DIOPT Version :10

Sequence 1:NP_651409.1 Gene:jigr1 / 43093 FlyBaseID:FBgn0039350 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_612057.1 Gene:hng3 / 38090 FlyBaseID:FBgn0035160 Length:333 Species:Drosophila melanogaster


Alignment Length:140 Identity:36/140 - (25%)
Similarity:53/140 - (37%) Gaps:16/140 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LIREYRSHPVLYDRSNKRFKDKLYVAHIWEQIAHKLGYDATSIRERMTTLRNRYNIEKRRVENG- 96
            ||.|.:....|:|..:....::.....:|..:|...|.|....|.:...||..|....||  :| 
  Fly     6 LIFEVQQRRALWDARHPDHANRPETQRLWNAVAEATGMDVELCRTKWKNLRCSYRRSNRR--SGI 68

  Fly    97 LSTQSS-----QWPLFESLQFLGDHIRPRRSFKNMSVKEEDEET-----YEVDDCRSDSNGHMNS 151
            |..|.|     ||...|::.||...   |....|.:..||:.|:     .|.....|.......|
  Fly    69 LKHQQSPSPGHQWSYAEAMSFLDGQ---REECDNSNNGEEEMESALKIEAEHMPMLSTFKSEQVS 130

  Fly   152 IKDELEDDSE 161
            ..||:|.|::
  Fly   131 AADEMEADND 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jigr1NP_651409.1 MADF 33..118 CDD:214738 24/90 (27%)
hng3NP_612057.1 MADF 5..91 CDD:214738 23/86 (27%)
BESS 240..274 CDD:460758
Blue background indicates that the domain is not in the aligned region.

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