DRSC/TRiP Functional Genomics Resources

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Protein Alignment jigr1 and CG13204

DIOPT Version :10

Sequence 1:NP_651409.1 Gene:jigr1 / 43093 FlyBaseID:FBgn0039350 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_610678.1 Gene:CG13204 / 36227 FlyBaseID:FBgn0033627 Length:605 Species:Drosophila melanogaster


Alignment Length:139 Identity:34/139 - (24%)
Similarity:62/139 - (44%) Gaps:11/139 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TYAQTGEFDLGLIREYRSHPVLYDRSNKRFKDKLYVAHIWEQIAHKLGYDATSIRERMTTLRNRY 86
            |...|.:| :.::::|   .|:|:..|..:|:......:|.|||.::|....:.:.:...||:.|
  Fly    16 TSDNTSDF-IEIVKKY---DVVYNNHNPDYKNVEVKLKVWTQIADEIGLSVEASKRKWKNLRDSY 76

  Fly    87 N--IEKRRVENGLSTQSSQWPLFESLQFLGDHIRPRRSFKNMSVKEEDEETYEVDD-----CRSD 144
            .  :...||....|.:...|...:.:.||.....|.|:..|.:.|..||:..|.|.     .::.
  Fly    77 TKYLRSFRVGTKTSKKYQYWAHADHMDFLKPFQGPGRNSANGNGKSNDEDDTECDFGYQVLAKAA 141

  Fly   145 SNGHMNSIK 153
            |||..:.:|
  Fly   142 SNGGEDELK 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jigr1NP_651409.1 MADF 33..118 CDD:214738 19/86 (22%)
CG13204NP_610678.1 MADF 22..108 CDD:214738 20/89 (22%)
BESS 478..510 CDD:460758
Blue background indicates that the domain is not in the aligned region.

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