DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jigr1 and CG10949

DIOPT Version :10

Sequence 1:NP_651409.1 Gene:jigr1 / 43093 FlyBaseID:FBgn0039350 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_610032.1 Gene:CG10949 / 35310 FlyBaseID:FBgn0032858 Length:459 Species:Drosophila melanogaster


Alignment Length:356 Identity:76/356 - (21%)
Similarity:113/356 - (31%) Gaps:120/356 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LIREYRSHPVLYDRSNKRFKDKLYVAH-IWEQIAHKLGYDATSIRERMTTLRNRYNIEKRRVENG 96
            ||...:||||||||...|....|...: .|.:|:..|.........|...||:|:..|.|..:..
  Fly   141 LIELVKSHPVLYDRHKIRVSKNLAAKNEAWREISENLNVSEELCYNRWKKLRDRFGREFRSHQIN 205

  Fly    97 LSTQSSQWPLFESLQFLGDHIR----------------PRRSFKNMSVK----------EEDEET 135
            .||..: |..|..|.|||.|.|                |:..  |.|.|          ...|:.
  Fly   206 QSTPIT-WRYFNDLLFLGRHFRKGVPLVLENIKRRGRPPKAG--NPSGKTSKQPEGMVISSGEQI 267

  Fly   136 YEVDDCRSDSNGHMNSIKDELEDDSE---------IFDCEQALPVTTVLGIPLNNSDEANKSQRS 191
            :..|...|..|       |:||||.|         :.:.|||.|...:|.......|.....|..
  Fly   268 WGADYPYSTDN-------DDLEDDLELAYDEEIEILSEAEQATPYDFILSEATARQDLEPPQQLQ 325

  Fly   192 TNGEMPNGKGYNHFAESYHRRHQNQPEYIISSPIVNPMRSNKRGSQHLDDHPSKRRVDDSLSISG 256
            .....|                ....|.|.:...|||:                  |::|.|:.|
  Fly   326 VTTTTP----------------ATSEEIIHTIARVNPV------------------VEESSSLPG 356

  Fly   257 YYPTQPLAPLPPAYAKFRGFGEFMCHSLCDMPAATA---LRLVQKFTRELVQSSLRNEDSGSKEK 318
                   ..:|.|             ::.|....|.   :..|.:.:||| |:.:.:|....:|:
  Fly   357 -------DSVPSA-------------AISDKLLTTVIANMETVLQQSREL-QAQIHHEQEQEREQ 400

  Fly   319 ----------------TDEVDPVDQSSESQE 333
                            .|.:.|.:::|..::
  Fly   401 RSTQPANSLLAKAQMLLDGLSPSERASAERK 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jigr1NP_651409.1 MADF 33..118 CDD:214738 30/85 (35%)
CG10949NP_610032.1 MADF 5..91 CDD:214738
MADF 140..226 CDD:214738 30/85 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.