Protein Alignment jigr1 and Hmr

DIOPT Version :10

• Sequence 1: NP_651409.1
• Gene: jigr1 / 43093
• FlyBaseID: FBgn0039350
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_572637.2
• Gene: Hmr / 31988
• FlyBaseID: FBgn0001206
• Length: 1413
• Species: Drosophila melanogaster
• Alignment Length: 376
• Identity: 83/376 - (22%)
• Similarity: 138/376 - (36%)
• Gaps: 111/376 - (29%)

  Fly    20 RATYAQTGEFDLGLIREYRS----------HPVLYDRSNKRFKDKLYVAHIWEQIAHKLGYDATS 74
            |.||  .|..|.|:::.||:          .|:|||..:.:|:|.......|::||.:|..:||:
  Fly    38 RCTY--PGSRDGGILQTYRAERLLIALVRRQPLLYDARHPKFRDVAQREKQWKKIASRLATNATN 100

  Fly    75 IRERMTTLRNRYNIEKRRVEN------GLSTQSSQW-PLF---ESLQFLGDHIR---------PR 120
            .:...:.||.:|....||:.|      .....:.:| |..   |.::|:..|:.         |.
  Fly   101 CKRSWSALRYKYQRHVRRLRNFHRSAIQKDRAALRWRPCMEYEEEMRFMYTHVARFPLIVDKIPT 165

  Fly   121 RSFKNMSVKEEDEETYEVDDCRSDSNGHMNSIKDELEDD-----------SEIFDCEQALPV--- 171
            ...:    ||..:|:....|.....|..|:.|..::|:|           ..:.:...|.|:
  Fly   166 EILE----KEHVDESETRPDVEVIENPPMDIIDLDVEEDPTYNYRCNRLQRRLIEAVSAYPLLYD 226

  Fly   172 TTVLGI-----------PLNNS--DEANKSQR-----STNGEMPNGKGYNHFAESYHR-RHQNQP 217
            :|..|.           .::|.  |:|.|..:     .|..|.          |..|| ||....
  Fly   227 STCTGYQNTRHRFLIWSAISNEVHDKATKLMKCWLKLQTRYEW----------ELIHRPRHIGTS 281

  Fly   218 EYIISSPIVNPMRSNKRG-----SQHLDD--HPSKRRVDDSLSISGYYPTQPLAP---------- 265
            |.......:.|.....||     |::|.:  |   ..:::..::.....|....|
  Fly   282 ELCRLMDFMEPHVQRMRGTVCKSSKYLQNGWH---EPIENFHTVMALITTMRNMPELVQLTEDSL 343

  Fly   266 ----LPPAYAKF-RGFG-EFMC-HSLCDMPAATALRLVQKFTREL--VQSS 307
                .||.|.:| :..| |.|| |..|::   |.| :::.|..||  |:||
  Fly   344 HNKVKPPRYDEFWQKVGMEVMCSHEHCEV---TWL-VLRAFYHELQAVRSS 390

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
jigr1	NP_651409.1	MADF	33..118	CDD:214738	25/104 (24%)
Hmr	NP_572637.2	MADF_DNA_bdg	59..149	CDD:463144	21/89 (24%)
		GT1	213..295	CDD:474047	17/91 (19%)
		PHA03247	<474..864	CDD:223021