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Protein Alignment jigr1 and HMGB1

DIOPT Version :9

Sequence 1:	NP_001097920.1	Gene:	jigr1 / 43093	FlyBaseID:	FBgn0039350	Length:	336	Species:	Drosophila melanogaster
Sequence 2:	NP_001300821.1	Gene:	HMGB1 / 3146	HGNCID:	4983	Length:	215	Species:	Homo sapiens

Alignment Length:	197	Identity:	37/197 - (18%)
Similarity:	67/197 - (34%)	Gaps:	59/197 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly   197 PNGK--GYNHFAESYHRRHQNQ-PEYIIS--------SPIVNPMRSNKRGSQHLDDHPSKRRVDD 250
            |.||  .|..|.::....|:.: |:..::        |.....|.:.::|.  .:|.....:...
Human     9 PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGK--FEDMAKADKARY 71

  Fly   251 SLSISGYYPTQ---------PLAPLPPAYA----------KFRG-------------FGEFMCHS 283
            ...:..|.|.:         |.||..|..|          |.:|             .||...::
Human    72 EREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT 136

  Fly   284 LCD--MP-AATALRLVQKFTREL-----------VQSSLRNEDSGSKEKTDEVDPVDQSSESQEE 334
            ..|  .| ...|.:|.:|:.:::           .:..:...:...|:|.:|.|..|:..|.:||
Human   137 AADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 201

  Fly   335 DE 336
            ||
Human   202 DE 203

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.